RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 UBE2V2Q15819 145 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4L9Q6RFH8 374 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 TMPRSS11AQ6ZMR5 421 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 ANGPTL5Q86XS5 388 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 EGFL6Q8IUX8 553 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 POC1AQ8NBT0 407 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 OR10AC1Q8NH08 325 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 PP6455Q8WZ26 134 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 ADAT3Q96EY9 351 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 BORCS8Q96FH0 119 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 ZNF488Q96MN9 340 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 JAM3Q9BX67 310 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 COMMD4Q9H0A8 199 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 CHCHD3Q9NX63 227 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DUX4Q9UBX2 424 aa10.47□□□□□ -0.73
SMARCE1-218ENST00000582955 DOCK11Q5JSL3 2073 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 TRBV2A0A0J9YWF9 115 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 KIR2DS1A0A191URI9 304 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 TMEM212A6NML5 194 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 OR2AT4A6NND4 320 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 NDUFB3O43676 98 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 TCF21O43680 179 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 RGS9O75916 674 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 PLATP00750 562 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 TFF1P04155 84 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 FUT6P51993 359 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 SRSF2Q01130 221 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 OR2G6Q5TZ20 316 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 BTN2A1Q7KYR7 527 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 BATF2Q8N1L9 274 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 FGFRL1Q8N441 504 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 OR51A4Q8NGJ6 313 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 OR5AK2Q8NH90 309 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 HAVCR2Q8TDQ0 301 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 NRG4Q8WWG1 115 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 TMEM80Q96HE8 168 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 DNTTIP1Q9H147 329 aa10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 DIMT1Q9UNQ2 313 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 CAB39Q9Y376 341 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 EXOSC1Q9Y3B2 195 aaKnown RBP10.46□□□□□ -0.73
SMARCE1-218ENST00000582955 EFCAB10A6NFE3 127 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 RNF212BA8MTL3 300 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 XPNPEP2O43895 674 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 FCN3O75636 299 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 NXPH2O95156 264 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 ZFPL1O95159 310 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 ECDO95905 644 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 FSHBP01225 129 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 PGA5P0DJD9 388 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 PSG2P11465 335 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 SELLP14151 372 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 AMY2BP19961 511 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 TGM4P49221 684 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 GTF2A1P52655 376 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 AQP4P55087 323 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 FGF12P61328 243 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 IL13RA1P78552 427 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 SMIM21Q3B7S5 101 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 LRRC10Q5BKY1 277 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 ATPAF1Q5TC12 328 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 ZNF788Q6ZQV5 615 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 CALHM1Q8IU99 346 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 BPIFB2Q8N4F0 458 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 PNLDC1Q8NA58 520 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 BPIFB6Q8NFQ5 453 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 ANGPTL6Q8NI99 470 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 ZNF418Q8TF45 676 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 TSEN15Q8WW01 171 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 C22orf15Q8WYQ4 148 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 H1FXQ92522 213 aaKnown RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 TFAP2CQ92754 450 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 GGHQ92820 318 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 DACT3Q96B18 629 aaPredicted RBP10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 MED30Q96HR3 178 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 GAFA1Q96PS6 74 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 MDFIQ99750 246 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 PDCD1LG2Q9BQ51 273 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 PKIBQ9C010 78 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 VCX3BQ9H321 246 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 RASL12Q9NYN1 266 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 CLEC2DQ9UHP7 191 aa10.45□□□□□ -0.74
SMARCE1-218ENST00000582955 IGKV1D-17A0A075B6S4 117 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 IGKV1-27A0A075B6S5 117 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 IGHV3OR16-10A0A075B7F0 116 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 TRAV40A0A0B4J280 105 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 INMTO95050 263 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 LIPFP07098 398 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 RPSAP08865 295 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 PIPP12273 146 aaPredicted RBP10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 ATF1P18846 271 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 PRKACBP22694 351 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 FPR2P25090 351 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 MPZP25189 248 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 AZGP1P25311 298 aaKnown RBP10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 RBP2P50120 134 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 ATP1B3P54709 279 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 MTCP1P56278 107 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 ST3GAL4Q11206 333 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 IL24Q13007 206 aa10.44□□□□□ -0.74
SMARCE1-218ENST00000582955 KLF17Q5JT82 389 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms