RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SPIN1	Q9Y657	262 aa	Predicted RBP	3.72	□□□□□ -1.81
MSI2-216	ENST00000582772		A0A087WV62	115 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	TTC36	A6NLP5	189 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	IGLL5	B9A064	214 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	C5orf58	C9J3I9	102 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	C11orf94	C9JXX5	98 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CTDSP2	O14595	271 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	TBX1	O43435	398 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	TPST2	O60704	377 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	APOL3	O95236	402 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	NUDT14	O95848	222 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CD74	P04233	296 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	AMY1A	P04745	511 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	AMY2A	P04746	511 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	HSMCR30	P0CW71	290 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	NR2F1	P10589	423 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	EGR2	P11161	476 aa	Predicted RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	BTF3	P20290	206 aa	Known RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	ETV6	P41212	452 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	TGM4	P49221	684 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	ETV1	P50549	477 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CCR4	P51679	360 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	NCBP2	P52298	156 aa	Known RBP eCLIP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CDC42	P60953	191 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	TRA2B	P62995	288 aa	Known RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CDK5	Q00535	292 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	RUNX1	Q01196	453 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	PRKCD	Q05655	676 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	ZNF616	Q08AN1	781 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	PIN1	Q13526	163 aa	Predicted RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	GINS1	Q14691	196 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	QPRT	Q15274	297 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	ENTPD8	Q5MY95	495 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CD300LD	Q6UXZ3	194 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772		Q6ZR03	302 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	GDPD3	Q7L5L3	318 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CCDC190	Q86UF4	302 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	LINC00528	Q8N1L1	170 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	PARP16	Q8N5Y8	322 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	NANOGP1	Q8N7R0	232 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	TCEANC	Q8N8B7	351 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	MINDY2	Q8NBR6	621 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	OR11H1	Q8NG94	326 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	OR4K5	Q8NGD3	323 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	OR52I1	Q8NGK6	324 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	OR6T1	Q8NGN1	323 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	BBS10	Q8TAM1	723 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	SFXN5	Q8TD22	340 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	XAGE5	Q8WWM1	108 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	NABP1	Q96AH0	204 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CREB3L1	Q96BA8	519 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	FOXRED1	Q96CU9	486 aa	Predicted RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	GIMAP5	Q96F15	307 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	ZNF582	Q96NG8	517 aa	Predicted RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	MGLL	Q99685	303 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	TSSK6	Q9BXA6	273 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	QRSL1	Q9H0R6	528 aa	Known RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	POLR2J3	Q9H1A7	115 aa	Known RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	SLC38A1	Q9H2H9	487 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	MIXL1	Q9H2W2	232 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	ZNF556	Q9HAH1	456 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	C3orf14	Q9HBI5	128 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CDH20	Q9HBT6	801 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	BCL2L10	Q9HD36	194 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	SLC35C2	Q9NQQ7	365 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CTPS2	Q9NRF8	586 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	ABCB10	Q9NRK6	738 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CHCHD3	Q9NX63	227 aa	Known RBP	3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	GIN1	Q9NXP7	522 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	P2RX2	Q9UBL9	471 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	CHRNA9	Q9UGM1	479 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	MKLN1	Q9UL63	735 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	A3GALT2	U3KPV4	340 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772	USH2A	O75445	5202 aa		3.71	□□□□□ -1.82
MSI2-216	ENST00000582772		A0A075B6Q4	140 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772		A0A087WUU8	490 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772		A0A1W2PRQ8	180 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	DVL1	O14640	695 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	OIP5	O43482	229 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	ATP6V1G1	O75348	118 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	VAMP5	O95183	116 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	LYPD3	O95274	346 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	HMGN2	P05204	90 aa	Known RBP	3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	SCG5	P05408	212 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	SDHA	P31040	664 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	TNFSF8	P32971	234 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	RPS19	P39019	145 aa	Known RBP	3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	APOBEC1	P41238	236 aa	Known RBP	3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	MAP3K8	P41279	467 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	GSTM5	P46439	218 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	RPS25	P62851	125 aa	Known RBP	3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	HOXC5	Q00444	222 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	FOXE3	Q13461	319 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	LASP1	Q14847	261 aa	Known RBP	3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	MED22	Q15528	200 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	TBC1D28	Q2M2D7	210 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	ABCA11P	Q4W5N1	156 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	FAM201A	Q5SY85	155 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	THEM4	Q5T1C6	240 aa		3.7	□□□□□ -1.82
MSI2-216	ENST00000582772	MEDAG	Q5VYS4	303 aa		3.7	□□□□□ -1.82

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms