RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 A0A1W2PRV1 198 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 PQLC2LA1A4F0 135 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 LOC110117498-PIK3R3F6TDL0 507 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 M0QZ24 198 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 RHBDL1O75783 438 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 RBP4P02753 201 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 OR2T7P0C7T2 308 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 OMGP23515 440 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 FASP25445 335 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 SAA4P35542 130 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 TAF9Q16594 264 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 LIAT1Q6ZQX7 453 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 EGFL6Q8IUX8 553 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 FGFRL1Q8N441 504 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 OR5T2Q8NGG2 359 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 OR2T27Q8NH04 317 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 NRIP2Q9BQI9 281 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 CDCA4Q9BXL8 241 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 PKIBQ9C010 78 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 MMP27Q9H306 513 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 FBLN5Q9UBX5 448 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 COPS3Q9UNS2 423 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 PIGLQ9Y2B2 252 aa11.86□□□□□ -0.51
SMARCE1-216ENST00000580419 A0A1B0GTI1 187 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 PRR32B1ATL7 298 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 ZNF670-ZNF695F2Z2N8 137 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 SLC1A7O00341 560 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 SELLP14151 372 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 FAHP16930 419 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 HCCSP53701 268 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 CXCR4P61073 352 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 ELF3P78545 371 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 IL24Q13007 206 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 PLCXD3Q63HM9 321 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 HAGHLQ6PII5 290 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 SLC35F2Q8IXU6 374 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 OR14K1Q8NGZ2 314 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 TRUB1Q8WWH5 349 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 H1FXQ92522 213 aaKnown RBP11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 RANBP3Q9H6Z4 567 aaPredicted RBP11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 HEXA-AS1Q9H8Q6 139 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 RAB18Q9NP72 206 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 SIRT7Q9NRC8 400 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 SNTG1Q9NSN8 517 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 OR52A1Q9UKL2 312 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 IKZF2Q9UKS7 526 aa11.85□□□□□ -0.51
SMARCE1-216ENST00000580419 A0A1W2PQ09 198 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 PAHP00439 452 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 NDUFB7P17568 137 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 HTR1FP30939 366 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 CEP78Q5JTW2 689 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 BCL2L15Q5TBC7 163 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 BRICD5Q6PL45 260 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 Q6ZSV7 163 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 MOB3CQ70IA8 216 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 COMMD2Q86X83 199 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 TCEANCQ8N8B7 351 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 ZNRF1Q8ND25 227 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 OR8J1Q8NGP2 316 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 RFKQ969G6 155 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 GABARAPL3Q9BY60 117 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 USE1Q9NZ43 259 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 MRM2Q9UI43 246 aaKnown RBP11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 AP4S1Q9Y587 144 aa11.84□□□□□ -0.51
SMARCE1-216ENST00000580419 RFPL4AA6NLU0 287 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 VGLL3A8MV65 326 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 RFPL4AL1F8VTS6 287 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 KRT8P05787 483 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 MRPL3P09001 348 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 PRDX2P32119 198 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 HAAOP46952 286 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 GABRA2P47869 451 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 RPL31P62899 125 aaKnown RBP11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 MFGE8Q08431 387 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 SLC25A30Q5SVS4 291 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 DHRS7BQ6IAN0 325 aaPredicted RBP11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 HCP5Q6MZN7 132 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 C11orf42Q8N5U0 333 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 AJUBAQ96IF1 538 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 SLC22A13Q9Y226 551 aa11.83□□□□□ -0.52
SMARCE1-216ENST00000580419 MEIOCA2RUB1 952 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 FAM90A8PA6NJQ4 464 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 H0YAE9 185 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 K7N7A8 449 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 PSMD9O00233 223 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 RPSAP08865 295 aaKnown RBP11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 EPHA2P29317 976 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 ISL1P61371 349 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 TMEM200BQ69YZ2 307 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 ASPHD2Q6ICH7 369 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 CRIP3Q6Q6R5 217 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 KCTD20Q7Z5Y7 419 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 CATSPERDQ86XM0 798 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 Q8IYB0 196 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 CD177Q8N6Q3 437 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 DNAAF1Q8NEP3 725 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 TMEM185AQ8NFB2 350 aa11.82□□□□□ -0.52
SMARCE1-216ENST00000580419 PP6455Q8WZ26 134 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms