RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 MFSD1Q9H3U5 465 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 RPF2Q9H7B2 306 aaKnown RBP2.44□□□□□ -2.02
KPNB1-208ENST00000580019 ZNF556Q9HAH1 456 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 EXOSC4Q9NPD3 245 aaKnown RBP2.44□□□□□ -2.02
KPNB1-208ENST00000580019 FBXO6Q9NRD1 293 aaPredicted RBP2.44□□□□□ -2.02
KPNB1-208ENST00000580019 PLCXD1Q9NUJ7 323 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 VSIG4Q9Y279 399 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 ZNF256Q9Y2P7 627 aaPredicted RBP2.44□□□□□ -2.02
KPNB1-208ENST00000580019 KLF12Q9Y4X4 402 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 MTCH2Q9Y6C9 303 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 KCNE3Q9Y6H6 103 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 GVINP1Q7Z2Y8 2422 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 ASH1LQ9NR48 2969 aaKnown RBP2.44□□□□□ -2.02
KPNB1-208ENST00000580019 USP24Q9UPU5 2620 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 LAMB1P07942 1786 aa2.44□□□□□ -2.02
KPNB1-208ENST00000580019 VPS13AQ96RL7 3174 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 LRRC37A2A6NM11 1700 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 IGKV6D-41A0A0C4DH26 115 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FAM240AA0A1B0GVK7 77 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 RPL37AP8A6NKH3 93 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 OR2AT4A6NND4 320 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FAM72CH0Y354 149 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 J3QLI3 93 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 TNFRSF11BO00300 401 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 GABRPO00591 440 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 CDIPTO14735 213 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ACOX3O15254 700 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 MAGEB4O15481 346 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 PHF1O43189 567 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FGF16O43320 207 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SYNGR1O43759 233 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 MPZL2O60487 215 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 TBL1XO60907 577 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 UGT2B11O75310 529 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 UPK1BO75841 260 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SNAPINO95295 136 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 RAB3DO95716 219 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 CALB1P05937 261 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 OR8U8P0C7N1 319 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SLC35G6P0C7Q6 338 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C8orf88P0DMB2 117 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ATF6P18850 670 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 HTR1DP28221 377 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FMO3P31513 532 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 GTF2H1P32780 548 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 VDAC2P45880 294 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SLCO1A2P46721 670 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 IDH2P48735 452 aaKnown RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SERPINB9P50453 376 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 DLX1P56177 255 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 RAB38P57729 211 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 OR10A3P58181 314 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 OR12D2P58182 307 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 PPP1CBP62140 327 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SLC35A1P78382 337 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ACVR1Q04771 509 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 MXD1Q05195 221 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 MLLT11Q13015 90 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 GPNMBQ14956 572 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ACSM3Q53FZ2 586 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C2CD6Q53TS8 623 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ACTBL2Q562R1 376 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ZNF506Q5JVG8 444 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 LCE3EQ5T5B0 92 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ADAMTSL4-AS1Q5T5F5 129 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SYT6Q5T7P8 510 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C9orf66Q5T8R8 295 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FAM72AQ5TYM5 149 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C1orf146Q5VVC0 180 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ANKRD22Q5VYY1 191 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FAM72DQ6L9T8 149 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 MED27Q6P2C8 311 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 UNQ9370/PRO34162Q6UXP9 181 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 AKAP14Q86UN6 197 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FAM72BQ86X60 149 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 CDC20BQ86Y33 519 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 RAB43Q86YS6 212 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 APLFQ8IW19 511 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 FBXO16Q8IX29 292 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C10orf67Q8IYJ2 551 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C6orf223Q8N319 242 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 ZADH2Q8N4Q0 377 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SPICQ8N5J4 248 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 METTL13Q8N6R0 699 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C4orf32Q8N8J7 132 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 AQP11Q8NBQ7 271 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 CHST4Q8NCG5 386 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 PIGXQ8TBF5 258 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 VN1R17PQ8TDU5 208 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 NPRL2Q8WTW4 380 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 C22orf15Q8WYQ4 148 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 SMIM19Q96E16 107 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 RNF145Q96MT1 663 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 NOL4LQ96MY1 436 aaPredicted RBP2.43□□□□□ -2.02
KPNB1-208ENST00000580019 MBOAT7Q96N66 472 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 RBP7Q96R05 134 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 OR5M11Q96RB7 305 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 STACQ99469 402 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 RASL11BQ9BPW5 248 aa2.43□□□□□ -2.02
KPNB1-208ENST00000580019 COA1Q9GZY4 146 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms