RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	MAP2K3	P46734	347 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	HCCS	P53701	268 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	EDDM3B	P56851	147 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	RPS7	P62081	194 aa	Known RBP	7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	BLCAP	P62952	87 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	FAM76B	Q5HYJ3	339 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	LDLRAD2	Q5SZI1	272 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	PLBD1	Q6P4A8	553 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	KRT77	Q7Z794	578 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	ASCC1	Q8N9N2	400 aa	Known RBP	7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	OR5AU1	Q8NGC0	362 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	OTOS	Q8NHW6	89 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	CDRT15	Q96T59	188 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	ELAC2	Q9BQ52	826 aa	Known RBP	7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	MUC13	Q9H3R2	512 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	CMC2	Q9NRP2	79 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	GTF2A1L	Q9UNN4	478 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	SAMHD1	Q9Y3Z3	626 aa	Known RBP	7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	LRP12	Q9Y561	859 aa		7.75	□□□□□ -1.17
MSI2-208	ENST00000579466	OR5B21	A6NL26	309 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	MTRF1	O75570	445 aa	Known RBP	7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	INMT	O95050	263 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	NXPH2	O95156	264 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	MRPL3	P09001	348 aa	Known RBP	7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	HAAO	P46952	286 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	KRTAP10-11	P60412	298 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	ESRRG	P62508	458 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	CBX1	P83916	185 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	SLC34A1	Q06495	639 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	CD69	Q07108	199 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	CEACAM21	Q3KPI0	293 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466		Q8N2B8	174 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	ZNF561	Q8N587	486 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	DTX3	Q8N9I9	347 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	POC1A	Q8NBT0	407 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	OR10G2	Q8NGC3	310 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	OR51E1	Q8TCB6	317 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	WIPF2	Q8TF74	440 aa	Predicted RBP	7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	FOXRED1	Q96CU9	486 aa	Predicted RBP	7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	NIPSNAP1	Q9BPW8	284 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	WNT10A	Q9GZT5	417 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	MYLK2	Q9H1R3	596 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	CCDC134	Q9H6E4	229 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	REEP1	Q9H902	201 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	GPR84	Q9NQS5	396 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	GPR173	Q9NS66	373 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	PITPNC1	Q9UKF7	332 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	PIGL	Q9Y2B2	252 aa		7.74	□□□□□ -1.17
MSI2-208	ENST00000579466	TMEM269	A0A1B0GVZ9	245 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	TCRBV4S1A1T	A0A5B7	111 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466		A6NIN4	97 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	FAM90A8P	A6NJQ4	464 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	SH2D7	A6NKC9	451 aa	Predicted RBP	7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	VGLL3	A8MV65	326 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	ODF3B	A8MYP8	253 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	PRR23D1	E9PI22	279 aa	Predicted RBP	7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	GSC2	O15499	205 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	TK1	P04183	234 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	PGA5	P0DJD9	388 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	PRR23D2	P0DMB1	279 aa	Predicted RBP	7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	CD24	P25063	80 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	PRDX6	P30041	224 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	HMGA2	P52926	109 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	OR12D2	P58182	307 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	SLC35A2	P78381	396 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	RIPPLY1	Q0D2K3	151 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	EDDM3A	Q14507	147 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	MICA	Q29983	383 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	C10orf99	Q6UWK7	81 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	ASRGL1	Q7L266	308 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	TRPM8	Q7Z2W7	1104 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	DEFB107A	Q8IZN7	70 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	PGAM4	Q8N0Y7	254 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	ZNF454	Q8N9F8	522 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	BBS1	Q8NFJ9	593 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	OR13D1	Q8NGV5	346 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	NDNF	Q8TB73	568 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	TRMT10A	Q8TBZ6	339 aa	Known RBP	7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	OR8B4	Q96RC9	309 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	ENPP5	Q9UJA9	477 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	LAMP5	Q9UJQ1	280 aa		7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	TBL2	Q9Y4P3	447 aa	Known RBP	7.73	□□□□□ -1.17
MSI2-208	ENST00000579466	C17orf98	A8MV24	154 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466		H3BSH0	61 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466		J3QT63	122 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ALDOB	P05062	364 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	IGHV1-8	P0DP01	117 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	DLX6	P56179	175 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ACTA2	P62736	377 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ACTG2	P63267	376 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ACTC1	P68032	377 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ACTA1	P68133	377 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	CD83	Q01151	205 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	COL10A1	Q03692	680 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	MFGE8	Q08431	387 aa	Predicted RBP	7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	TCTEX1D4	Q5JR98	221 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	C9orf152	Q5JTZ5	239 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ZNF684	Q5T5D7	378 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	ZNF626	Q68DY1	528 aa		7.72	□□□□□ -1.17
MSI2-208	ENST00000579466	OR2T5	Q6IEZ7	315 aa		7.72	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms