RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 LYNP07948 512 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 CLUP10909 449 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 ATP6V1B1P15313 513 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 HOXD3P31249 432 aaPredicted RBP10.72□□□□□ -0.69
COPS3-214ENST00000577246 PSME3P61289 254 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 SLC34A1Q06495 639 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 SF3A3Q12874 501 aaKnown RBP eCLIP10.72□□□□□ -0.69
COPS3-214ENST00000577246 IL18R1Q13478 541 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 ZNF273Q14593 569 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 TMEM95Q3KNT9 176 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 CEP78Q5JTW2 689 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 LCN1P1Q5VSP4 162 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 ZNF770Q6IQ21 691 aaPredicted RBP10.72□□□□□ -0.69
COPS3-214ENST00000577246 UNQ9370/PRO34162Q6UXP9 181 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 KRT74Q7RTS7 529 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 CD177Q8N6Q3 437 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 ZNF454Q8N9F8 522 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 MYDGFQ969H8 173 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 CHID1Q9BWS9 393 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 INPP5EQ9NRR6 644 aa10.72□□□□□ -0.69
COPS3-214ENST00000577246 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 DNAJC8O75937 253 aaPredicted RBP10.71□□□□□ -0.69
COPS3-214ENST00000577246 NXPH2O95156 264 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 ZNF728P0DKX0 622 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 ARHGDIBP52566 201 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 PSMA6P60900 246 aaKnown RBP10.71□□□□□ -0.69
COPS3-214ENST00000577246 COL7A1Q02388 2944 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 COL10A1Q03692 680 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 LINC01590Q5TEZ4 76 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 Q6ZS46 218 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 ZBTB49Q6ZSB9 765 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 RNF144BQ7Z419 303 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 ZNF573Q86YE8 665 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 OR8D4Q8NGM9 314 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 NDNFQ8TB73 568 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 CMTM5Q96DZ9 223 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 LYZL4Q96KX0 146 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 LIN7BQ9HAP6 207 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 U3KQK5 164 aa10.71□□□□□ -0.69
COPS3-214ENST00000577246 A0A0U1RQV5 110 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 ACOD1A6NK06 481 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 FAM90A22PA8MWA6 464 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 TNFRSF11BO00300 401 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 GSC2O15499 205 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 IGHV1-8P0DP01 117 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 PIPP12273 146 aaPredicted RBP10.7□□□□□ -0.7
COPS3-214ENST00000577246 H2AFXP16104 143 aaPredicted RBP10.7□□□□□ -0.7
COPS3-214ENST00000577246 LMO1P25800 156 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 RIPPLY1Q0D2K3 151 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 TCTEX1D4Q5JR98 221 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 PLCXD3Q63HM9 321 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 CGB2Q6NT52 195 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 HDXQ7Z353 690 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 COMMD2Q86X83 199 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 LINC00482Q8N8I6 264 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 OR9Q2Q8NGE9 314 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 OR8B12Q8NGG6 310 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 OTOSQ8NHW6 89 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 THEM6Q8WUY1 208 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 OTULINQ96BN8 352 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 NSMCE2Q96MF7 247 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 AMELYQ99218 206 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 BTBD10Q9BSF8 475 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 CMC2Q9NRP2 79 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.7□□□□□ -0.7
COPS3-214ENST00000577246 HILPDAQ9Y5L2 63 aa10.7□□□□□ -0.7
COPS3-214ENST00000577246 J3QT63 122 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 NOS1APO75052 506 aaPredicted RBP10.69□□□□□ -0.7
COPS3-214ENST00000577246 CCNB2O95067 398 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 PGA5P0DJD9 388 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 BRS3P32247 399 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 HAAOP46952 286 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 HMGA2P52926 109 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 DLX6P56179 175 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 ZNF684Q5T5D7 378 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 MOB3CQ70IA8 216 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 GDPD3Q7L5L3 318 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 OR4Q3Q8NH05 313 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 ZNF714Q96N38 554 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 OR8B4Q96RC9 309 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 OR14J1Q9UGF5 321 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 ENPP5Q9UJA9 477 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 LYVE1Q9Y5Y7 322 aa10.69□□□□□ -0.7
COPS3-214ENST00000577246 K7N7A8 449 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 RAMP3O60896 148 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 ZFPL1O95159 310 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 GASTP01350 101 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 LPLP06858 475 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 SLC6A1P30531 599 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 CEBPDP49716 269 aaPredicted RBP10.68□□□□□ -0.7
COPS3-214ENST00000577246 EDDM3BP56851 147 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 ACTA2P62736 377 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 ACTG2P63267 376 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 ACTC1P68032 377 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 ACTA1P68133 377 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 DGCR2P98153 550 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 MEF2CQ06413 473 aaPredicted RBP10.68□□□□□ -0.7
COPS3-214ENST00000577246 KRT77Q7Z794 578 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 RNF148Q8N7C7 305 aa10.68□□□□□ -0.7
COPS3-214ENST00000577246 ASCC1Q8N9N2 400 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms