RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 SHBGP04278 402 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 IGF1P05019 195 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 OR8U8P0C7N1 319 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ANXA3P12429 323 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 RPL22P35268 128 aaKnown RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 HPCAL1P37235 193 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 GNPDA1P46926 289 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 IDH3GP51553 393 aaPredicted RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 XKP51811 444 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 PKNOX1P55347 436 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 PSME3P61289 254 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 LSM6P62312 80 aaKnown RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 ST3GAL3Q11203 375 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 STX4Q12846 297 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 TFDP2Q14188 446 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ATXN7L3Q14CW9 347 aaPredicted RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 LRRC26Q2I0M4 334 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ZNF658BQ4V348 819 aaPredicted RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 TIMM23BQ5SRD1 257 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 TPRG1LQ5T0D9 272 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ANKRD22Q5VYY1 191 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 KCTD16Q68DU8 428 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 NCBP2-AS2Q69YL0 99 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 OR8G2PQ6IF36 304 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ENPP6Q6UWR7 440 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 AHSA2Q719I0 299 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 COX15Q7KZN9 410 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 STRADAQ7RTN6 431 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 DEFB128Q7Z7B8 93 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 TMEM25Q86YD3 366 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 CLVS1Q8IUQ0 354 aaPredicted RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 STK40Q8N2I9 435 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 DHRSXQ8N5I4 330 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ZSCAN4Q8NAM6 433 aaPredicted RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 OR4F6Q8NGB9 312 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 OR2Y1Q8NGV0 311 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 OR6K2Q8NGY2 324 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 CA5BP1Q8WTZ4 195 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 FAM104AQ969W3 186 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 PTH2Q96A98 100 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ISOC2Q96AB3 205 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 OLFM3Q96PB7 478 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 QKIQ96PU8 341 aaKnown RBP eCLIP3.39□□□□□ -1.872e-6■■■■□ 21.4
NUP88-213ENST00000576862 RNF157Q96PX1 679 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 SMIM14Q96QK8 99 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 RBBP8Q99708 897 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 DHRS9Q9BPW9 319 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 DDA1Q9BW61 102 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 GLIPR2Q9H4G4 154 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 DHX35Q9H5Z1 703 aaKnown RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 POPDC2Q9HBU9 364 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 SIRT7Q9NRC8 400 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 PAK1IP1Q9NWT1 392 aaPredicted RBP3.39□□□□□ -1.87
NUP88-213ENST00000576862 DDIT4Q9NX09 232 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 SMPXQ9UHP9 88 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 NEU3Q9UQ49 428 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 PSG11Q9UQ72 335 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 SNX10Q9Y5X0 201 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 ARL5AQ9Y689 179 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 PLXNA1Q9UIW2 1896 aa3.39□□□□□ -1.87
NUP88-213ENST00000576862 IGHV1OR15-1A0A075B7D0 117 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 IGHV7-81A0A0B4J1V7 117 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 PSMB11A5LHX3 300 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 SLC22A20A6NK97 555 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 C9J4A7 227 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 H7C0C1 242 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 DCTN6O00399 190 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 EFNA2O43921 213 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 MFSD11O43934 449 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 CTNSO60931 367 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 BANF1O75531 89 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 LRATO95237 230 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 IGLV3-25P01717 112 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 IGHV3-48P01763 117 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 HPNP05981 417 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 GUSBP08236 651 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 CT62P0C5K7 136 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 HLA-GP17693 338 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 IFNA8P32881 189 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 MAGEA12P43365 314 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 KIR2DS2P43631 304 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 GPR1P46091 355 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 SLCO1A2P46721 670 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 OMPP47874 163 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 PRLHRP49683 370 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 ARPP19P56211 112 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 CAV1Q03135 178 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 TNFRSF9Q07011 255 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 FLOT2Q14254 428 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 FRMPD2BQ6IN97 320 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 FAHD1Q6P587 224 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 SPESP1Q6UW49 350 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 DRAM2Q6UX65 266 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 ACOT7LQ6ZUV0 252 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 LANCL3Q6ZV70 420 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 CALHM1Q8IU99 346 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 ZFP82Q8N141 532 aa3.38□□□□□ -1.87
NUP88-213ENST00000576862 PDIK1LQ8N165 341 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms