RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 HIST2H2BDQ6DRA6 164 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 FAM57BQ71RH2 274 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 RHOUQ7L0Q8 258 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 PRSS45Q7RTY3 260 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 DPY19L4Q7Z388 723 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 VMO1Q7Z5L0 202 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 ERI1Q8IV48 349 aaKnown RBP5.11□□□□□ -1.59
NUP88-212ENST00000576708 SLC7A5P1Q8MH63 180 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 PNKDQ8N490 385 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 OR1M1Q8NGA1 313 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 OR8S1Q8NH09 359 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 OR4F5Q8NH21 305 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 LRTOMTQ8WZ04 291 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 SGCDQ92629 289 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 OTULINQ96BN8 352 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 REEP6Q96HR9 211 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 NIPSNAP1Q9BPW8 284 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 ABHD6Q9BV23 337 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 TRIM15Q9C019 465 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 FGF23Q9GZV9 251 aaPredicted RBP5.11□□□□□ -1.59
NUP88-212ENST00000576708 SLC22A4Q9H015 551 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 BEX1Q9HBH7 125 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 NOX4Q9NPH5 578 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 SIRT7Q9NRC8 400 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 SNTG1Q9NSN8 517 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 ACOXLQ9NUZ1 547 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 ETAA1Q9NY74 926 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 IL20Q9NYY1 176 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 MRPL15Q9P015 296 aaKnown RBP5.11□□□□□ -1.59
NUP88-212ENST00000576708 ONECUT1Q9UBC0 465 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 DKK2Q9UBU2 259 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 RPUSD1Q9UJJ7 312 aaKnown RBP5.11□□□□□ -1.59
NUP88-212ENST00000576708 RHBDD3Q9Y3P4 386 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 PCDHGB5Q9Y5G0 923 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 MMP24Q9Y5R2 645 aa5.11□□□□□ -1.59
NUP88-212ENST00000576708 hCG_38984A0A1B0GV85 526 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 CLPSL1A2RUU4 121 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 ZNF878C9JN71 531 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 CDIPTO14735 213 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 XRCC2O43543 280 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 NDUFA2O43678 99 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 KRT36O76013 467 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 NDUFA7O95182 113 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 LIPFP07098 398 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 PEX2P28328 305 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 MAGEA2P43356 314 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 IER3P46695 156 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 ALDH3A2P51648 485 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 SLC25A1P53007 311 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 UCP3P55916 312 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 ZNF121P58317 390 aaPredicted RBP5.1□□□□□ -1.59
NUP88-212ENST00000576708 GNGT1P63211 74 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 MS4A2Q01362 244 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 KCNJ8Q15842 424 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 TAF9Q16594 264 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 DMRTC1Q5HYR2 192 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 TEX30Q5JUR7 227 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 TEX36Q5VZQ5 186 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 RPL13AP3Q6NVV1 102 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 C16orf89Q6UX73 402 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 WDR82Q6UXN9 313 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 C17orf107Q6ZR85 190 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 KRT74Q7RTS7 529 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 TMEM179BQ7Z7N9 219 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 TMEM86BQ8N661 226 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 Q8N7P7 452 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 PNLDC1Q8NA58 520 aaKnown RBP5.1□□□□□ -1.59
NUP88-212ENST00000576708 SCCPDHQ8NBX0 429 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 LY6G5BQ8NDX9 201 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 OR6N2Q8NGY6 317 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 RNF133Q8WVZ7 376 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 RPL3LQ92901 407 aaKnown RBP5.1□□□□□ -1.59
NUP88-212ENST00000576708 SPSB4Q96A44 273 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 PGAM5Q96HS1 289 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 FAM71F1Q96KD3 344 aaPredicted RBP5.1□□□□□ -1.59
NUP88-212ENST00000576708 CCT8L2Q96SF2 557 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 INTS14Q96SY0 518 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 CITED1Q99966 193 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 WDR13Q9H1Z4 485 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 GHITMQ9H3K2 345 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 ELL3Q9HB65 397 aaPredicted RBP5.1□□□□□ -1.59
NUP88-212ENST00000576708 ACTR3BQ9P1U1 418 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 KLHDC2Q9Y2U9 406 aa5.1□□□□□ -1.59
NUP88-212ENST00000576708 NOP16Q9Y3C1 178 aaKnown RBP5.1□□□□□ -1.59
NUP88-212ENST00000576708 SAMHD1Q9Y3Z3 626 aaKnown RBP5.1□□□□□ -1.59
NUP88-212ENST00000576708 A0A087X0M5 115 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 A0A1B0GX30 115 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 RIIAD1A6NNX1 92 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 ZNF850A8MQ14 1090 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 RNASEK-C17orf49H0YIS7 233 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 AKR7A2O43488 359 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 SELENOFO60613 162 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 H2BFMP0C1H6 154 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 ACKR3P25106 362 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 PAX6P26367 422 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 POU1F1P28069 291 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 HSD11B1P28845 292 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 GRK5P34947 590 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 DDOSTP39656 456 aa5.09□□□□□ -1.59
NUP88-212ENST00000576708 OPRL1P41146 370 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms