RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 PPP5D1E7EU14 171 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 ERGP11308 486 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 TCN2P20062 427 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 DVL1P1P54792 670 aaPredicted RBP15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 TFAP2EQ6VUC0 442 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 SYT13Q7L8C5 426 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 AGBL5Q8NDL9 886 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 SLC26A10Q8NG04 563 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 MRPS24Q96EL2 167 aaKnown RBP15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 UFSP2Q9NUQ7 469 aa15.88■□□□□ 0.13
ATPAF1-214ENST00000576409 NUDT19A8MXV4 375 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 CTRB1P17538 263 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 GABRA2P47869 451 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 HTD2P86397 168 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 CTRB2Q6GPI1 263 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 Q7L0L9 218 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 MRGPREQ86SM8 312 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 OR6S1Q8NH40 331 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 PHYHIPLQ96FC7 376 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 OR5AC2Q9NZP5 309 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 GNG12Q9UBI6 72 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 LPAR3Q9UBY5 353 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 MT-ND4LP03901 98 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 TAS2R30P59541 319 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 VHLLQ6RSH7 139 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 DMBX1Q8NFW5 382 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 EDAQ92838 391 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 PIK3IP1Q96FE7 263 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 ARV1Q9H2C2 271 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 TMEM100Q9NV29 134 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 WDR81Q562E7 1941 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 C5orf49A4QMS7 147 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 C1orf87Q8N0U7 546 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 OR10J5Q8NHC4 309 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 GPBAR1Q8TDU6 330 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 RAB39BQ96DA2 213 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 USB1Q9BQ65 265 aaKnown RBP15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 MOB1AQ9H8S9 216 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 LAMP3Q9UQV4 416 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 WSB1Q9Y6I7 421 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 MGAMO43451 1857 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 SBF1O95248 1867 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 SERPINE3A8MV23 424 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 SRPXP78539 464 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 OR5C1Q8NGR4 320 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 PTPMT1Q8WUK0 201 aaPredicted RBP15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 SLC25A43Q8WUT9 341 aaPredicted RBP15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 TMEM37Q8WXS4 190 aa15.87■□□□□ 0.13
ATPAF1-214ENST00000576409 PAPPA2Q9BXP8 1791 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 BRCA1P38398 1863 aaKnown RBP15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 CENPFP49454 3210 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 DOCK8Q8NF50 2099 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 CCL2P13500 99 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 CEACAM16Q2WEN9 425 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 SPATA46Q5T0L3 261 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 RBMS3Q6XE24 437 aaKnown RBP15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 SMIM7Q9BQ49 75 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 A0A1W2PPC1 479 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 DUSP3P51452 185 aaPredicted RBP15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 CATSPERDQ86XM0 798 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 NOXO1Q8NFA2 376 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 OR2I1PQ8NGU4 316 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 SHARPINQ9H0F6 387 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 WDR13Q9H1Z4 485 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 CEP350Q5VT06 3117 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 ZNF587BE7ETH6 402 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 SIRPB1O00241 398 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 MUC1P15941 1255 aaPredicted RBP15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 KIR2DL1P43626 348 aaPredicted RBP15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 TGIF1Q15583 401 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 RSPO4Q2I0M5 234 aaPredicted RBP15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 MRGPRX4Q96LA9 322 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 OSGIN2Q9Y236 505 aa15.86■□□□□ 0.13
ATPAF1-214ENST00000576409 BRWD3Q6RI45 1802 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 TMEM127O75204 238 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 MDKP21741 143 aaPredicted RBP15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 ZNF787Q6DD87 383 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 ZNF774Q6NX45 483 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 ZNF429Q86V71 674 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 LINC01590Q5TEZ4 76 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 ZNF468Q5VIY5 522 aaPredicted RBP15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 OSR2Q8N2R0 312 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 OR4F5Q8NH21 305 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 OR4F4Q96R69 305 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 NPDC1Q9NQX5 325 aaPredicted RBP15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 ARTNQ5T4W7 220 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 PIPOXQ9P0Z9 390 aa15.85■□□□□ 0.13
ATPAF1-214ENST00000576409 RBBP6Q7Z6E9 1792 aaKnown RBP15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 ZNF646O15015 1829 aaPredicted RBP15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 LMO7DNF2Z398 122 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 FGF8P55075 233 aaPredicted RBP15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 ERVK-16P61578 105 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 FUT7Q11130 342 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 MSMO1Q15800 293 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 LYZL2Q7Z4W2 148 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 LDLRAD3Q86YD5 345 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 ASB13Q8WXK3 278 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 HEYLQ9NQ87 328 aaPredicted RBP15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 KLF4O43474 513 aa15.84■□□□□ 0.13
ATPAF1-214ENST00000576409 LAMTOR5O43504 91 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms