RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 KHDC1LQ5JSQ8 128 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 SAMD4BQ5PRF9 694 aaKnown RBP7.21□□□□□ -1.26
SMG6-218ENST00000575454 LCN1P1Q5VSP4 162 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 HAGHLQ6PII5 290 aaPredicted RBP7.21□□□□□ -1.26
SMG6-218ENST00000575454 LYPD4Q6UWN0 246 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 HACD2Q6Y1H2 254 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 ACP7Q6ZNF0 438 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 Q6ZS46 218 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 MRPL41Q8IXM3 137 aaKnown RBP7.21□□□□□ -1.26
SMG6-218ENST00000575454 ZNF454Q8N9F8 522 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 POC1AQ8NBT0 407 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 AQP3Q92482 292 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 PYURFQ96I23 114 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 NMNAT2Q9BZQ4 307 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 EGLN3Q9H6Z9 239 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 GORASP2Q9H8Y8 452 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 LIN7BQ9HAP6 207 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 IL20Q9NYY1 176 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 ZNF319Q9P2F9 582 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 PLXNB1O43157 2135 aa7.21□□□□□ -1.26
SMG6-218ENST00000575454 RYR1P21817 5038 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 ACOD1A6NK06 481 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 RIIAD1A6NNX1 92 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 M0QZK8 103 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 NOS1APO75052 506 aaPredicted RBP7.2□□□□□ -1.26
SMG6-218ENST00000575454 PGA5P0DJD9 388 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 IGHV1-8P0DP01 117 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 ZNF3P17036 446 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 GSTT1P30711 240 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 RRM2P31350 389 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 BRS3P32247 399 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 RIPPLY1Q0D2K3 151 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 CRMP1Q14194 572 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 ZNF273Q14593 569 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 C8orf82Q6P1X6 216 aaPredicted RBP7.2□□□□□ -1.26
SMG6-218ENST00000575454 RASSF6Q6ZTQ3 369 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 ZNF573Q86YE8 665 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 ERI1Q8IV48 349 aaKnown RBP7.2□□□□□ -1.26
SMG6-218ENST00000575454 CD177Q8N6Q3 437 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 OR2T33Q8NG76 320 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 OR6N2Q8NGY6 317 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 NDNFQ8TB73 568 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 STMN2Q93045 179 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 IL1RAPQ9NPH3 570 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 TBC1D23Q9NUY8 699 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 POLDIP2Q9Y2S7 368 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 HILPDAQ9Y5L2 63 aa7.2□□□□□ -1.26
SMG6-218ENST00000575454 PCLOQ9Y6V0 5065 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 K7N7A8 449 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 GSC2O15499 205 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 NXPH2O95156 264 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 FABP3P05413 133 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 GYPBP06028 91 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 LPLP06858 475 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 LYNP07948 512 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 CHRM2P08172 466 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 PIPP12273 146 aaPredicted RBP7.19□□□□□ -1.26
SMG6-218ENST00000575454 COX4I1P13073 169 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 H2AFXP16104 143 aaPredicted RBP7.19□□□□□ -1.26
SMG6-218ENST00000575454 HTR1DP28221 377 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 MYCNOSP40205 109 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 DLX6P56179 175 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 MEF2CQ06413 473 aaPredicted RBP7.19□□□□□ -1.26
SMG6-218ENST00000575454 CEP78Q5JTW2 689 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 LINC01590Q5TEZ4 76 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 GDPD3Q7L5L3 318 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 OSR2Q8N2R0 312 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 ZNF714Q96N38 554 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 ZNF649Q9BS31 505 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 TSSK6Q9BXA6 273 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 FGF23Q9GZV9 251 aaPredicted RBP7.19□□□□□ -1.26
SMG6-218ENST00000575454 SPAG4Q9NPE6 437 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 ZFP57Q9NU63 452 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 ABCD2Q9UBJ2 740 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMG6-218ENST00000575454 PCDHGB5Q9Y5G0 923 aa7.19□□□□□ -1.26
SMG6-218ENST00000575454 A0A0U1RQV5 110 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 hADV38S2A0JD32 116 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 CCDC22O60826 627 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 OR2F2O95006 317 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 SEMG1P04279 462 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 HAAOP46952 286 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 CEBPDP49716 269 aaPredicted RBP7.18□□□□□ -1.26
SMG6-218ENST00000575454 THBS3P49746 956 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 HMGA2P52926 109 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
SMG6-218ENST00000575454 PSME3P61289 254 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 ACTA2P62736 377 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 ACTG2P63267 376 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 ACTC1P68032 377 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 ACTA1P68133 377 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 ABCA11PQ4W5N1 156 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 LDLRAD2Q5SZI1 272 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 ZNF684Q5T5D7 378 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 PLCXD3Q63HM9 321 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 PLBD1Q6P4A8 553 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 KCTD18Q6PI47 426 aaPredicted RBP7.18□□□□□ -1.26
SMG6-218ENST00000575454 MOB3CQ70IA8 216 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 OTOSQ8NHW6 89 aa7.18□□□□□ -1.26
SMG6-218ENST00000575454 MUC7Q8TAX7 377 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms