RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 MEOX2P50222 304 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 RRADP55042 308 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 SLC35A1P78382 337 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 SMCO1Q147U7 214 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 FADS6Q8N9I5 356 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 LYPD6BQ8NI32 183 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 SLC25A43Q8WUT9 341 aaPredicted RBP16.66■□□□□ 0.26
SCARF1-206ENST00000573852 NABP1Q96AH0 204 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 SPACA9Q96E40 222 aaPredicted RBP16.66■□□□□ 0.26
SCARF1-206ENST00000573852 CLCC1Q96S66 551 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 NELFAQ9H3P2 528 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 PADI1Q9ULC6 663 aa16.66■□□□□ 0.26
SCARF1-206ENST00000573852 DKK1O94907 266 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 GUCA1AP43080 201 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-206ENST00000573852 HABP2Q14520 560 aaPredicted RBP16.65■□□□□ 0.26
SCARF1-206ENST00000573852 Q96M66 194 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 ZNF385AQ96PM9 386 aaKnown RBP16.65■□□□□ 0.26
SCARF1-206ENST00000573852 FAAP24Q9BTP7 215 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 SMCO4Q9NRQ5 59 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 ANXA10Q9UJ72 324 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 IGHV3-15A0A0B4J1V0 119 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 IFNA21P01568 189 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 TMEM225BP0DP42 221 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 ARL6IP1Q15041 203 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 PPA1Q15181 289 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 SP6Q3SY56 376 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 OPN5Q6U736 354 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 SLC22A8Q8TCC7 542 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 RNF122Q9H9V4 155 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 DECR2Q9NUI1 292 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 POMT1Q9Y6A1 747 aa16.65■□□□□ 0.26
SCARF1-206ENST00000573852 OR5H8P0DN80 308 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 ECI1P42126 302 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 FAM3AP98173 230 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 OR9K2Q8NGE7 335 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 C14orf79Q96F83 325 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 SPSB2Q99619 263 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 CRB3Q9BUF7 120 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 IFT22Q9H7X7 185 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 GPR173Q9NS66 373 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 ZMAT5Q9UDW3 170 aaKnown RBP16.64■□□□□ 0.26
SCARF1-206ENST00000573852 TIMM10BQ9Y5J6 103 aa16.64■□□□□ 0.26
SCARF1-206ENST00000573852 ANGPTL7O43827 346 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 OPRM1P35372 400 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 PPT1P50897 306 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 H3F3AP84243 136 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 HGFACQ04756 655 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 SWI5Q1ZZU3 235 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 SNAI3Q3KNW1 292 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 RTL6Q6ICC9 239 aa16.64■□□□□ 0.25
SCARF1-206ENST00000573852 M0R135 149 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 MBPP02686 304 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 SRFP11831 508 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 OTX1P32242 354 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 EIF1P41567 113 aaKnown RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 PIGPP57054 158 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 C10orf128Q5T292 105 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 Q6ZSR3 168 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 UBAC2Q8NBM4 344 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 TMEM54Q969K7 222 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF799Q96GE5 643 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 DEFB126Q9BYW3 111 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 PCED1AQ9H1Q7 454 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 AKIRIN1Q9H9L7 192 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 CHCHD2Q9Y6H1 151 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 WDFY3Q8IZQ1 3526 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 IFNA4P05014 189 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 CD63P08962 238 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 FOLR2P14207 255 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 SNRPEP62304 92 aaKnown RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 HIST1H3AP68431 136 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 TAF9Q16594 264 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 HIST2H3PS2Q5TEC6 136 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 HIST2H3AQ71DI3 136 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 TOMM40LQ969M1 308 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 RBM24Q9BX46 236 aaKnown RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 AK3Q9UIJ7 227 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 STARD10Q9Y365 291 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 SPRY1O43609 319 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 EIF3GO75821 320 aaKnown RBP eCLIP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 MTCP1P56278 107 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 CHAF1BQ13112 559 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF385CQ66K41 422 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-206ENST00000573852 SGK3Q96BR1 496 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 UCN2Q96RP3 112 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 EGLN1Q9GZT9 426 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 WFDC1Q9HC57 220 aa16.63■□□□□ 0.25
SCARF1-206ENST00000573852 NME2P1O60361 137 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 ACKR3P25106 362 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF133P52736 654 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-206ENST00000573852 MIDNQ504T8 468 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 ZNF837Q96EG3 531 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-206ENST00000573852 SCRT1Q9BWW7 348 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 ARV1Q9H2C2 271 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 PLEKHA2Q9HB19 425 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 RPS10P5Q9NQ39 176 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 PLEK2Q9NYT0 353 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 MASP2O00187 686 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 TSPAN15O95858 294 aa16.62■□□□□ 0.25
SCARF1-206ENST00000573852 APOC1P02654 83 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms