RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 RBM39Q14498 530 aaKnown RBP19.84■□□□□ 0.77
VPS53-211ENST00000571805 YRDCQ86U90 279 aaKnown RBP19.84■□□□□ 0.77
VPS53-211ENST00000571805 OR1F12Q8NHA8 337 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 ZC4H2Q9NQZ6 224 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 PATE3B3GLJ2 98 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 ECI1P42126 302 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 PLXDC2Q6UX71 529 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 GGNQ86UU5 652 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 TMEM200AQ86VY9 491 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 WDR5BQ86VZ2 330 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 FAAP24Q9BTP7 215 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 ACKR4Q9NPB9 350 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 TMEM38BQ9NVV0 291 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 ZNF581Q9P0T4 197 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 ANXA10Q9UJ72 324 aa19.84■□□□□ 0.77
VPS53-211ENST00000571805 DMDP11532 3685 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 ZNF716A6NP11 495 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 ATP6V1G2-DDX39BF2Z307 99 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 ABCD4O14678 606 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 SPRY1O43609 319 aaPredicted RBP19.83■□□□□ 0.77
VPS53-211ENST00000571805 CTSDP07339 412 aaPredicted RBP19.83■□□□□ 0.77
VPS53-211ENST00000571805 ADCYAP1P18509 176 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 SRD5A2P31213 254 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 FOLR3P41439 243 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 MST1LQ2TV78 715 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 KRTAP27-1Q3LI81 207 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 SGCZQ96LD1 299 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 C1orf123Q9NWV4 160 aa19.83■□□□□ 0.77
VPS53-211ENST00000571805 FAM230AA0A1W2PPH8 454 aa19.83■□□□□ 0.76
VPS53-211ENST00000571805 PET100P0DJ07 73 aa19.83■□□□□ 0.76
VPS53-211ENST00000571805 SRSF3P84103 164 aaKnown RBP19.83■□□□□ 0.76
VPS53-211ENST00000571805 TAF9Q16594 264 aa19.83■□□□□ 0.76
VPS53-211ENST00000571805 ASCL4Q6XD76 172 aa19.83■□□□□ 0.76
VPS53-211ENST00000571805 LIME1Q9H400 295 aa19.83■□□□□ 0.76
VPS53-211ENST00000571805 HSF4Q9ULV5 492 aa19.83■□□□□ 0.76
VPS53-211ENST00000571805 EDARQ9UNE0 448 aa19.83■□□□□ 0.76
VPS53-211ENST00000571805 OR6C6A6NF89 314 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 TDGF1P13385 188 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 RBMXP38159 391 aaKnown RBP19.82■□□□□ 0.76
VPS53-211ENST00000571805 CARD18P57730 90 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 PDSS1Q5T2R2 415 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 ARL11Q969Q4 196 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 IER2Q9BTL4 223 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 AK3Q9UIJ7 227 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 TRIOBPQ9H2D6 2365 aa19.82■□□□□ 0.76
VPS53-211ENST00000571805 PLATP00750 562 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 SFTPBP07988 381 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 PATE4P0C8F1 98 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 PRSS12P56730 875 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 S100A10P60903 97 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 CHAF1BQ13112 559 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 RSU1Q15404 277 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 OR4A4PQ8NGN8 299 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 CPT1CQ8TCG5 803 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 KCNE4Q8WWG9 221 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 SLC39A1Q9NY26 324 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 MEMO1Q9Y316 297 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 CRYM-AS1A6NIL9 109 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 NUDT19A8MXV4 375 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 TERTO14746 1132 aaKnown RBP19.81■□□□□ 0.76
VPS53-211ENST00000571805 LCATP04180 440 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 HKR1P10072 659 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 ZNF708P17019 499 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 ZNF32P17041 273 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 RRADP55042 308 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 SPEM2Q0P670 501 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 ZNF169Q14929 603 aaPredicted RBP19.81■□□□□ 0.76
VPS53-211ENST00000571805 C10orf91Q5T1B1 145 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 AKR7LQ8NHP1 331 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 ADAMTS17Q8TE56 1095 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 SLC39A7Q92504 469 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 CNTNAP3BQ96NU0 1288 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 CNTNAP3Q9BZ76 1288 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 OR2S2Q9NQN1 319 aa19.81■□□□□ 0.76
VPS53-211ENST00000571805 GPR31O00270 319 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 OR5H8P0DN80 308 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 DUSP3P51452 185 aaPredicted RBP19.8■□□□□ 0.76
VPS53-211ENST00000571805 Q0VFX4 171 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 CNN3Q15417 329 aaKnown RBP19.8■□□□□ 0.76
VPS53-211ENST00000571805 IAH1Q2TAA2 248 aaPredicted RBP19.8■□□□□ 0.76
VPS53-211ENST00000571805 PABPC1L2AQ5JQF8 200 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 TMEM42Q69YG0 159 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 SGPP2Q8IWX5 399 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 OR14L1PQ8NHC6 308 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 MMP26Q9NRE1 261 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 LPAR3Q9UBY5 353 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 RFPL3SP0C7P2 107 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 B4GALT1P15291 398 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 SCRN3Q0VDG4 424 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 PUSL1Q8N0Z8 303 aaKnown RBP19.8■□□□□ 0.76
VPS53-211ENST00000571805 CLRN3Q8NCR9 226 aa19.8■□□□□ 0.76
VPS53-211ENST00000571805 TSNAXQ99598 290 aaKnown RBP19.8■□□□□ 0.76
VPS53-211ENST00000571805 CXCL13O43927 109 aa19.79■□□□□ 0.76
VPS53-211ENST00000571805 P04436 131 aa19.79■□□□□ 0.76
VPS53-211ENST00000571805 CHATP28329 748 aa19.79■□□□□ 0.76
VPS53-211ENST00000571805 RBP2P50120 134 aa19.79■□□□□ 0.76
VPS53-211ENST00000571805 PSG4Q00888 419 aa19.79■□□□□ 0.76
VPS53-211ENST00000571805 GUCA2BQ16661 112 aa19.79■□□□□ 0.76
VPS53-211ENST00000571805 CCDC157Q569K6 752 aa19.79■□□□□ 0.76
VPS53-211ENST00000571805 PEAR1Q5VY43 1037 aaPredicted RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms