RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ARSBP15848 533 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 ADRA2CP18825 462 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 THBS2P35442 1172 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 OR3A4PP47883 348 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 BMXP51813 675 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZNF154Q13106 437 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 RIN1Q13671 783 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 GPR176Q14439 515 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 P2RY14Q15391 338 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 TMEM255AQ5JRV8 349 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 PRAMEF6Q5VXH4 476 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 FOXB2Q5VYV0 432 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 ZNF529Q6P280 563 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 SLC25A26Q70HW3 274 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 MOGAT3Q86VF5 341 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 Q8IYB0 196 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 C1orf87Q8N0U7 546 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 ACOT12Q8WYK0 555 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 ERGIC1Q969X5 290 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 PHF21AQ96BD5 680 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 PSMG3-AS1Q96PY0 264 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 PKIBQ9C010 78 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 C6orf62Q9GZU0 229 aaPredicted RBP5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 METTL9Q9H1A3 318 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 PPIL3Q9H2H8 161 aaKnown RBP5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 CNTD2Q9H8S5 307 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 UFSP2Q9NUQ7 469 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 C1orf123Q9NWV4 160 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 GHRLQ9UBU3 117 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 ADAM30Q9UKF2 790 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 PPP1R3CQ9UQK1 317 aa5.59□□□□□ -1.51
CTDNEP1-204ENST00000570484 CHD6Q8TD26 2715 aa5.59□□□□□ -1.52
CTDNEP1-204ENST00000570484 INTS1Q8N201 2190 aaKnown RBP5.59□□□□□ -1.52
CTDNEP1-204ENST00000570484 IGHV1-69-2A0A0G2JMI3 117 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 A0A1W2PPR1 153 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SHISA3A0PJX4 238 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 IFNL4K9M1U5 179 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CDIPTO14735 213 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CRTAPO75718 401 aaPredicted RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 NXPH2O95156 264 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 BPNT1O95861 308 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 DANCRP0C864 163 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CALCBP10092 127 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZNF182P17025 639 aaPredicted RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SERPINA2P20848 420 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 S100A5P33763 92 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 TALDO1P37837 337 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CDKN1AP38936 164 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 RPS19P39019 145 aaKnown RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 PTGFRP43088 359 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 GATA4P43694 442 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CAV3P56539 151 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CLDN12P56749 244 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SCAND1P57086 179 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 GMFBP60983 142 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 IL24Q13007 206 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 PDZK1IP1Q13113 114 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM189A2Q15884 450 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CARTPTQ16568 116 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 HFEQ30201 348 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SMIM21Q3B7S5 101 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZNF404Q494X3 552 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SLC22A6Q4U2R8 563 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ASPHD2Q6ICH7 369 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 GLIPR1L1Q6UWM5 242 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 KRT74Q7RTS7 529 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ANGPTL5Q86XS5 388 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SAXO1Q8IYX7 474 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 BOLLQ8N9W6 283 aaKnown RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZSCAN4Q8NAM6 433 aaPredicted RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SCCPDHQ8NBX0 429 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR51F2Q8NH61 342 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 MCFD2Q8NI22 146 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 TBC1D15Q8TC07 691 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 LGALS14Q8TCE9 139 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 DYNC2LI1Q8TCX1 351 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 LRRC29Q8WV35 223 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 NEU4Q8WWR8 484 aaPredicted RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 AQP3Q92482 292 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 EMG1Q92979 244 aaKnown RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 SLAMF9Q96A28 289 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM3DQ96BQ1 224 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 CEP19Q96LK0 163 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 NKX3-1Q99801 234 aaPredicted RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 URM1Q9BTM9 101 aaKnown RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM59Q9BXS4 323 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 PPP1R3EQ9H7J1 279 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 BARX1Q9HBU1 254 aaPredicted RBP5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 PTTG2Q9NZH5 202 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ABRACLQ9P1F3 81 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 DNAJB11Q9UBS4 358 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ING4Q9UNL4 249 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 ETV7Q9Y603 341 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 NPTNQ9Y639 398 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 DOPEY1Q5JWR5 2465 aa5.58□□□□□ -1.52
CTDNEP1-204ENST00000570484 IGKV1-27A0A075B6S5 117 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 A0A0G2JK05 382 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 A0A1B0GWJ7 208 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 METTL21EPA6NDL7 271 aa5.57□□□□□ -1.52
CTDNEP1-204ENST00000570484 NKX6-3A6NJ46 265 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms