RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ENTPD8Q5MY95 495 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 GLYATL3Q5SZD4 288 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 TPTE2P1Q5T6R2 138 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 LCN12Q6JVE5 192 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 CROCCP2Q86T23 111 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 RTN4RL2Q86UN3 420 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 TGIF2LXQ8IUE1 241 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 C4orf33Q8N1A6 199 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 LNX2Q8N448 690 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 DEFB125Q8N687 156 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 CD177Q8N6Q3 437 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 OR52L1Q8NGH7 329 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 RPL3LQ92901 407 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 KCTD7Q96MP8 289 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 ZNF714Q96N38 554 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 MICU1Q9BPX6 476 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 NRIP2Q9BQI9 281 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 NEURL2Q9BR09 285 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 TOLLIPQ9H0E2 274 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 ALX4Q9H161 411 aaPredicted RBP4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 RAD21L1Q9H4I0 556 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 SP140LQ9H930 580 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 LIN7CQ9NUP9 197 aaKnown RBP4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 FBXL7Q9UJT9 491 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 POLR1DQ9Y2S0 133 aa4.97□□□□□ -1.61
HERPUD1-217ENST00000569429 NACAE9PAV3 2078 aa4.96□□□□□ -1.61
HERPUD1-217ENST00000569429 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 IGHV4OR15-8A0A075B7B6 117 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 A0A087WW49 117 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 ARRDC5A6NEK1 342 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 PRORSD1PA6NEY8 169 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 E9PBE3 544 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 H7C1C5 153 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 M0R135 149 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 SPAG7O75391 227 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 TK1P04183 234 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 VIMP08670 466 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 H2AFXP16104 143 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 ANOS1P23352 680 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 GCAP28676 217 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 PPIFP30405 207 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 DCTDP32321 178 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 CD81P60033 236 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 LCN6P62502 163 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 TRIM25Q14258 630 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 RFX4Q33E94 735 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 AGBL2Q5U5Z8 902 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 PGM2L1Q6PCE3 622 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 Q6ZR54 194 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 TCF23Q7RTU1 214 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 HDXQ7Z353 690 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 TSPYL5Q86VY4 417 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 LAX1Q8IWV1 398 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 CNPY4Q8N129 248 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 ABHD12Q8N2K0 398 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 Q8N402 240 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 LRRC75AQ8NAA5 344 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 ACMSDQ8TDX5 336 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 TMEM255BQ8WV15 326 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 MAL2Q969L2 176 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 SPSB4Q96A44 273 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 FLYWCH2Q96CP2 140 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 ZNF799Q96GE5 643 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 ZIM3Q96PE6 472 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 PAIP2Q9BPZ3 127 aaKnown RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 PRSS27Q9BQR3 290 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 MFFQ9GZY8 342 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 WDR55Q9H6Y2 383 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 TPT1P8Q9HAU6 139 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 PLEKHA1Q9HB21 404 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 RASL12Q9NYN1 266 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 SLC7A7Q9UM01 511 aa4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 COA3Q9Y2R0 106 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-217ENST00000569429 TRAPPC13A5PLN9 417 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 CPSF4LA6NMK7 179 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 ANXA2P2A6NMY6 339 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 BUB1B-PAK6H3BSN5 160 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 K7N7A8 449 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 LGALS9O00182 355 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 KHDRBS3O75525 346 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 SERPINA1P01009 418 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 IGLV1-40P01703 118 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 HSPB1P04792 205 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 CHRNGP07510 517 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 ZCCHC18P0CG32 403 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 CPA3P15088 417 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 GSTT1P30711 240 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 PRDX2P32119 198 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 RAB9AP51151 201 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 HES1Q14469 280 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 RBMS2Q15434 407 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 CCDC153Q494R4 210 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 Q5VSD8 79 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 CORO6Q6QEF8 472 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 ZBTB46Q86UZ6 589 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 KRT73Q86Y46 540 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 NKAIN4Q8IVV8 208 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 MREGQ8N565 214 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 POM121L12Q8N7R1 296 aa4.95□□□□□ -1.62
HERPUD1-217ENST00000569429 OR56B4Q8NH76 319 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms