RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 FAM168AQ92567 244 aa13.54□□□□□ -0.24
USB1-215ENST00000569252 RPL3LQ92901 407 aaKnown RBP13.54□□□□□ -0.24
USB1-215ENST00000569252 RAB1CQ92928 201 aa13.54□□□□□ -0.24
USB1-215ENST00000569252 FOXRED1Q96CU9 486 aaPredicted RBP13.54□□□□□ -0.24
USB1-215ENST00000569252 CHCHD6Q9BRQ6 235 aa13.54□□□□□ -0.24
USB1-215ENST00000569252 OR51I2Q9H344 312 aa13.54□□□□□ -0.24
USB1-215ENST00000569252 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
USB1-215ENST00000569252 TMEM106BQ9NUM4 274 aa13.54□□□□□ -0.24
USB1-215ENST00000569252 RNF7Q9UBF6 113 aa13.54□□□□□ -0.24
USB1-215ENST00000569252 IGKV1-9A0A0C4DH69 117 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 NDUFS8O00217 210 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 AIREO43918 545 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 SC5DO75845 299 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 FSTP19883 344 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 ZNF93P35789 620 aaPredicted RBP13.53□□□□□ -0.24
USB1-215ENST00000569252 INSL4Q14641 139 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 KISS1Q15726 138 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 MPPED2Q15777 294 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 CLEC12BQ2HXU8 276 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 ZNF181Q2M3W8 571 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 DDI2Q5TDH0 399 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 C22orf42Q6IC83 251 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 CD200R1LQ6Q8B3 271 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 ANGPTL5Q86XS5 388 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 CDH26Q8IXH8 852 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 JAGN1Q8N5M9 183 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 NKAIN3Q8N8D7 197 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 KCTD7Q96MP8 289 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 PKIBQ9C010 78 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 OR51E2Q9H255 320 aa13.53□□□□□ -0.24
USB1-215ENST00000569252 J3QT63 122 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 NOL3O60936 208 aaKnown RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 PTBP3O95758 552 aaKnown RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 PLATP00750 562 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 TFAP2AP05549 437 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 TMEM225BP0DP42 221 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 IGFBP3P17936 291 aaPredicted RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 GADD45AP24522 165 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 FGF9P31371 208 aaPredicted RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 GPR6P46095 362 aaPredicted RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 KCNJ8Q15842 424 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 ZNF529Q6P280 563 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 ZNF525Q8N782 197 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 BOLLQ8N9W6 283 aaKnown RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 OR52N4Q8NGI2 321 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 OR13F1Q8NGS4 319 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 OR10Z1Q8NGY1 313 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 Q8TCH9 128 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 ORAI1Q96D31 301 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 FAM192AQ9GZU8 254 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 ELL3Q9HB65 397 aaPredicted RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 PCDHB16Q9NRJ7 776 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 TXNL4BQ9NX01 149 aaKnown RBP13.52□□□□□ -0.25
USB1-215ENST00000569252 NPTNQ9Y639 398 aa13.52□□□□□ -0.25
USB1-215ENST00000569252 TRAV8-7A0A075B6U6 113 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 TRAV1-2A0A0B4J238 106 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 TRAPPC2LH3BP13 241 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 TMEM178BH3BS89 294 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 PIN1P1O15428 100 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 CYB5R3P00387 301 aaPredicted RBP13.51□□□□□ -0.25
USB1-215ENST00000569252 POU3F4P49335 361 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 IL24Q13007 206 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 PDZK1IP1Q13113 114 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 SPRNQ5BIV9 151 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 FAM27D1Q5T7N8 215 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 ZNF826PQ6ZT77 177 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 MAPK1IP1LQ8NDC0 245 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 OR51A2Q8NGJ7 313 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 OR51F2Q8NH61 342 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 LRRC29Q8WV35 223 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 YIPF5Q969M3 257 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 RFT1Q96AA3 541 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 YIPF6Q96EC8 236 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 SPACA5Q96QH8 159 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 FUNDC2Q9BWH2 189 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 TLNRD1Q9H1K6 362 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 ING4Q9UNL4 249 aa13.51□□□□□ -0.25
USB1-215ENST00000569252 ARFGEF3Q5TH69 2177 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 PPIAL4EA0A075B759 164 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 PPIAL4DF5H284 164 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 PPIAL4FP0DN26 164 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 GLRA1P23415 457 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 ALDH3B2P48448 385 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 FIP1L1Q6UN15 594 aaKnown RBP13.5□□□□□ -0.25
USB1-215ENST00000569252 WDR82Q6UXN9 313 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 SLC25A26Q70HW3 274 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 WDR86Q86TI4 376 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 Q8IYB0 196 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 ZSCAN4Q8NAM6 433 aaPredicted RBP13.5□□□□□ -0.25
USB1-215ENST00000569252 TNFAIP8L1Q8WVP5 186 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 AQP3Q92482 292 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 TMIGD2Q96BF3 282 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 UQCC2Q9BRT2 126 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 RASL12Q9NYN1 266 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 DNAJB11Q9UBS4 358 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 PPIAL4AQ9Y536 164 aa13.5□□□□□ -0.25
USB1-215ENST00000569252 CACNG2Q9Y698 323 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms