RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 FAM221AA4D161 298 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 FOXI3A8MTJ6 420 aaPredicted RBP12.45□□□□□ -0.42
CDH1-209ENST00000566510 KCNJ3P48549 501 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 PIGPP57054 158 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 SURF2Q15527 256 aaPredicted RBP12.45□□□□□ -0.42
CDH1-209ENST00000566510 RSPO1Q2MKA7 263 aaPredicted RBP12.45□□□□□ -0.42
CDH1-209ENST00000566510 AVPI1Q5T686 147 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 RPUSD3Q6P087 351 aaKnown RBP12.45□□□□□ -0.42
CDH1-209ENST00000566510 ETV3LQ6ZN32 361 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 ZNF837Q96EG3 531 aaPredicted RBP12.45□□□□□ -0.42
CDH1-209ENST00000566510 PCED1AQ9H1Q7 454 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDH1-209ENST00000566510 BIN3Q9NQY0 253 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 PCDHGA1Q9Y5H4 931 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 V9GYS6 101 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 A0A0U1RQV5 110 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 A0A1W2PQM1 296 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 C9JQL5 133 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 OR8U9P0C7N5 309 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 NR2C1P13056 603 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 PPT1P50897 306 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 ABCA11PQ4W5N1 156 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 TSPO2Q5TGU0 170 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 OR8U1Q8NH10 309 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 DYRK2Q92630 601 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 PRRX2Q99811 253 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 ULBP2Q9BZM5 246 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 ANXA10Q9UJ72 324 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 NXT1Q9UKK6 140 aaKnown RBP12.45□□□□□ -0.42
CDH1-209ENST00000566510 SHANK1Q9Y566 2161 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 CELSR3Q9NYQ7 3312 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 IGHV5-10-1A0A0J9YXX1 117 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 DEDDO75618 318 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 JTBO76095 146 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 DIRAS3O95661 229 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 ALDH3B1P43353 468 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 HOXA1P49639 335 aaPredicted RBP12.44□□□□□ -0.42
CDH1-209ENST00000566510 SULT1A2P50226 295 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 ZNF616Q08AN1 781 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 ARL6IP1Q15041 203 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 ZNF528Q3MIS6 628 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 GLYATL2Q8WU03 294 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 SPTSSAQ969W0 71 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 ESRP2Q9H6T0 727 aaKnown RBP12.44□□□□□ -0.42
CDH1-209ENST00000566510 KCNIP3Q9Y2W7 256 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 DHHO43323 396 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 F2RL1P55085 397 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 PHLDA2Q53GA4 152 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 DHRS11Q6UWP2 260 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 FADS6Q8N9I5 356 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 SECTM1Q8WVN6 248 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 SGK3Q96BR1 496 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 FBXO17Q96EF6 278 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 KIRREL1Q96J84 757 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 CCDC74BQ96LY2 380 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 PHF7Q9BWX1 381 aaPredicted RBP12.44□□□□□ -0.42
CDH1-209ENST00000566510 METTL9Q9H1A3 318 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 FSCN3Q9NQT6 498 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 AK3Q9UIJ7 227 aa12.44□□□□□ -0.42
CDH1-209ENST00000566510 MRPS17Q9Y2R5 130 aaKnown RBP12.44□□□□□ -0.42
CDH1-209ENST00000566510 CCDC85CA6NKD9 419 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 TOX3O15405 576 aaPredicted RBP12.43□□□□□ -0.42
CDH1-209ENST00000566510 CTSSP25774 331 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 RTL6Q6ICC9 239 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 LIME1Q9H400 295 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 B3GALT1Q9Y5Z6 326 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 MEX3AA1L020 520 aaKnown RBP12.43□□□□□ -0.42
CDH1-209ENST00000566510 CRYM-AS1A6NIL9 109 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 TNFSF11O14788 317 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 XRCC2O43543 280 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 NME2P1O60361 137 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 TSPAN15O95858 294 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 CTSDP07339 412 aaPredicted RBP12.43□□□□□ -0.42
CDH1-209ENST00000566510 FCGR3AP08637 254 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 ACKR3P25106 362 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 ZNF84P51523 738 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 ZNF133P52736 654 aaPredicted RBP12.43□□□□□ -0.42
CDH1-209ENST00000566510 PDCD1Q15116 288 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 BTNL8Q6UX41 500 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 OR9K2Q8NGE7 335 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 ERGIC1Q969X5 290 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 NABP1Q96AH0 204 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 Q96M66 194 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 RPS10P5Q9NQ39 176 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 OCIAD1Q9NX40 245 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 DKKL1Q9UK85 242 aa12.43□□□□□ -0.42
CDH1-209ENST00000566510 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
CDH1-209ENST00000566510 A0A1B0GV50 99 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 IGLV3-1P01715 115 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 OR5AC1P0C628 307 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 PATE4P0C8F1 98 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 ZNF728P0DKX0 622 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 CCL3P10147 92 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 ECI1P42126 302 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 H3F3AP84243 136 aa12.42□□□□□ -0.42
CDH1-209ENST00000566510 SHBQ15464 509 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms