RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 FZR1Q9UM11 496 aa5.35□□□□□ -1.55
CHD9-217ENST00000565832 RBMX2Q9Y388 322 aaKnown RBP5.35□□□□□ -1.55
CHD9-217ENST00000565832 ARID1AO14497 2285 aa5.35□□□□□ -1.55
CHD9-217ENST00000565832 HIVEP3Q5T1R4 2406 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 EPG5Q9HCE0 2579 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 KIAA2026Q5HYC2 2103 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 CRYBG3Q68DQ2 2970 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 F8VVB4 439 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 F8VWA3 439 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 WDR1O75083 606 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 RBBP9O75884 186 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 CD3DP04234 171 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 SFTPBP07988 381 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 GLI4P10075 376 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 SELEP16581 610 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 MNDAP41218 407 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 ID4P47928 161 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 NPBWR2P48146 333 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 GPM6AP51674 278 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 HOXA4Q00056 320 aaPredicted RBP5.34□□□□□ -1.55
CHD9-217ENST00000565832 TATDN3Q17R31 274 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 ZNF260Q3ZCT1 412 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 KRTCAP3Q53RY4 240 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 CLVS2Q5SYC1 327 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 PLCXD3Q63HM9 321 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 TMEM42Q69YG0 159 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 OR52W1Q6IF63 320 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 MZT2BQ6NZ67 158 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 GFRALQ6UXV0 394 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 DNM1P46Q6ZS02 220 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 Q6ZTK2 550 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 LIX1LQ8IVB5 337 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 BEST4Q8NFU0 473 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 OR6K3Q8NGY3 331 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 FAM57AQ8TBR7 257 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 APOBEC3DQ96AK3 386 aaPredicted RBP5.34□□□□□ -1.55
CHD9-217ENST00000565832 ARHGAP5-AS1Q96IT6 56 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 PAPOLGQ9BWT3 736 aaKnown RBP5.34□□□□□ -1.55
CHD9-217ENST00000565832 OR2J1Q9GZK6 312 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 TBCCD1Q9NVR7 557 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 PROCRQ9UNN8 238 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 SHANK1Q9Y566 2161 aa5.34□□□□□ -1.55
CHD9-217ENST00000565832 HRNRQ86YZ3 2850 aaPredicted RBP5.34□□□□□ -1.56
CHD9-217ENST00000565832 ARPC4-TTLL3A0A0A6YYG9 625 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 ANKRD20A5PA0PJZ0 165 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 METTL21EPA6NDL7 271 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 H3BS24 57 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 H7C417 338 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 M0QYG6 137 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 TMEM127O75204 238 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 TCRBP04435 133 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 CSN2P05814 226 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 CA6P23280 308 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 SCAND1P57086 179 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 ZP1P60852 638 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 PRDX4Q13162 271 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 C1orf185Q5T7R7 199 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 OR2A2Q6IF42 318 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 MRPL21Q7Z2W9 205 aaKnown RBP5.33□□□□□ -1.56
CHD9-217ENST00000565832 OR51T1Q8NGJ9 327 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 OR10R2Q8NGX6 335 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 OR56B4Q8NH76 319 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 HPSE2Q8WWQ2 592 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 AKAP1Q92667 903 aaKnown RBP eCLIP5.33□□□□□ -1.56
CHD9-217ENST00000565832 MARVELD1Q9BSK0 173 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 NEK6Q9HC98 313 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 MTFP1Q9UDX5 166 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 ZNF230Q9UIE0 474 aaPredicted RBP5.33□□□□□ -1.56
CHD9-217ENST00000565832 USP24Q9UPU5 2620 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 CHD3Q12873 2000 aaKnown RBP5.33□□□□□ -1.56
CHD9-217ENST00000565832 A0A0G2JNJ9 132 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 ZNF816-ZNF321PA0A0X1KG74 233 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 CD300LBA8K4G0 201 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 INMT-MINDY4F8WBC2 141 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 XRCC2O43543 280 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 SSX5O60225 188 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 COX5BP10606 129 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 GTF2F2P13984 249 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 MGMTP16455 207 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 COX5AP20674 150 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 GABRR1P24046 479 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 RBP2P50120 134 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 NKX2-5P52952 324 aaPredicted RBP5.33□□□□□ -1.56
CHD9-217ENST00000565832 SNU13P55769 128 aaKnown RBP5.33□□□□□ -1.56
CHD9-217ENST00000565832 UCP2P55851 309 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 MALLQ13021 153 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 PDZK1IP1Q13113 114 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 SNTB1Q13884 538 aaKnown RBP5.33□□□□□ -1.56
CHD9-217ENST00000565832 LY6DQ14210 128 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 TAF9Q16594 264 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 PIGYQ3MUY2 71 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 AGAP6Q5VW22 663 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 BAIAP2L2Q6UXY1 529 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 SLC25A26Q70HW3 274 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 C6orf201Q7Z4U5 140 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 ZNF554Q86TJ5 538 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 FJX1Q86VR8 437 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 PNLDC1Q8NA58 520 aaKnown RBP5.33□□□□□ -1.56
CHD9-217ENST00000565832 OR4C16Q8NGL9 310 aa5.33□□□□□ -1.56
CHD9-217ENST00000565832 OR51F2Q8NH61 342 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms