RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ZNF141Q15928 474 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 OPN5Q6U736 354 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 DCXRQ7Z4W1 244 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 OR5D18Q8NGL1 313 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 MMABQ96EY8 250 aaPredicted RBP14.33□□□□□ -0.12
LINC00554-201ENST00000564841 VSTM2LQ96N03 204 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC00554-201ENST00000564841 FSCN3Q9NQT6 498 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 IL18BPO95998 194 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 FOSL2P15408 326 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 FSTP19883 344 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 OR3A2P47893 321 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 UCP2P55851 309 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 RELQ04864 619 aaPredicted RBP14.33□□□□□ -0.12
LINC00554-201ENST00000564841 TNFRSF9Q07011 255 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 CYB561D1Q8N8Q1 229 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 KDF1Q8NAX2 398 aaPredicted RBP14.33□□□□□ -0.12
LINC00554-201ENST00000564841 ZFP62Q8NB50 900 aaPredicted RBP14.33□□□□□ -0.12
LINC00554-201ENST00000564841 SLC25A31Q9H0C2 315 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 OR14J1Q9UGF5 321 aa14.33□□□□□ -0.12
LINC00554-201ENST00000564841 SMCO3A2RU48 225 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 MEGF11A6BM72 1044 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 RPL36A-HNRNPH2H7BZ11 118 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 TNFSF14O43557 240 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 GAPDHP04406 335 aaKnown RBP14.32□□□□□ -0.12
LINC00554-201ENST00000564841 GZMBP10144 247 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 TSPO2Q5TGU0 170 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 WDFY1Q8IWB7 410 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 OR8D2Q9GZM6 311 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 HSF4Q9ULV5 492 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 IGKV1D-8A0A087WSZ0 117 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 STMND1H3BQB6 276 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 HSD17B6O14756 317 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 PTBP3O95758 552 aaKnown RBP14.32□□□□□ -0.12
LINC00554-201ENST00000564841 OR3A4PP47883 348 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 CSNK2A1P68400 391 aaPredicted RBP14.32□□□□□ -0.12
LINC00554-201ENST00000564841 GLIPR1L1Q6UWM5 242 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 DTWD2Q8NBA8 298 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 CSNK2A3Q8NEV1 391 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 ADOQ96SZ5 270 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 BCO1Q9HAY6 547 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 Q9N2J8 555 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 CACNA1EQ15878 2313 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 TTC28Q96AY4 2481 aa14.32□□□□□ -0.12
LINC00554-201ENST00000564841 IGHV5-51A0A0C4DH38 117 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 PRSS37A4D1T9 235 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 C2orf72A6NCS6 295 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 SLC33A1O00400 549 aaPredicted RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 MBPP02686 304 aaPredicted RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 MMP7P09237 267 aaPredicted RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 HLA-DOBP13765 273 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 FPR2P25090 351 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 CD27P26842 260 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 PCP4P48539 62 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 RND3P61587 244 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 KCTD18Q6PI47 426 aaPredicted RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 FNDC9Q8TBE3 224 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 CDX2Q99626 313 aaPredicted RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 C9J4A7 227 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 IFNA10P01566 189 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 BGLAPP02818 100 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 OR5H8P0DN80 308 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 SLC2A1P11166 492 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 ZNF25P17030 456 aaPredicted RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 ZNF429Q86V71 674 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 SLC26A10Q8NG04 563 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 THADAQ6YHU6 1953 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 URB1O60287 2271 aaKnown RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 RBMXP38159 391 aaKnown RBP14.31□□□□□ -0.12
LINC00554-201ENST00000564841 OR1D5P58170 312 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 WBP2NLQ6ICG8 309 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 SHISA6Q6ZSJ9 500 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 OR52N5Q8NH56 324 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 DGAT2Q96PD7 388 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 PBDC1Q9BVG4 233 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 LYRM4Q9HD34 91 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 SIRT7Q9NRC8 400 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 R4GMQ9 66 aa14.31□□□□□ -0.12
LINC00554-201ENST00000564841 IGLV1-36A0A0B4J1U3 117 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 SLC35E2P0CK97 266 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 CD200P41217 278 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 OR1D4P47884 311 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 SNU13P55769 128 aaKnown RBP14.3□□□□□ -0.12
LINC00554-201ENST00000564841 ROM1Q03395 351 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 PEG10Q86TG7 708 aaKnown RBP14.3□□□□□ -0.12
LINC00554-201ENST00000564841 HPSE2Q8WWQ2 592 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 DDA1Q9BW61 102 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 SNHG12Q9BXW3 62 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 OR10A5Q9H207 317 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 OSGIN2Q9Y236 505 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 MRPS17Q9Y2R5 130 aaKnown RBP14.3□□□□□ -0.12
LINC00554-201ENST00000564841 MEMO1Q9Y316 297 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 MMACHCQ9Y4U1 282 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 IGKV1D-43A0A0B4J1Z2 117 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 A6NNC1 897 aa14.3□□□□□ -0.12
LINC00554-201ENST00000564841 SRSF10O75494 262 aaKnown RBP14.3□□□□□ -0.12
LINC00554-201ENST00000564841 ZNF93P35789 620 aaPredicted RBP14.3□□□□□ -0.12
LINC00554-201ENST00000564841 NOVA1P51513 510 aaKnown RBP14.3□□□□□ -0.12
LINC00554-201ENST00000564841 ZNF880Q6PDB4 577 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms