RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CASP6P55212 293 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 IGLV3-21P80748 117 aaPredicted RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 ELOBQ15370 118 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 SOHLH1Q5JUK2 328 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 DCAF12Q5T6F0 453 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 ZNF385CQ66K41 422 aaPredicted RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 LCN10Q6JVE6 187 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 DPY19L4Q7Z388 723 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 SUMF2Q8NBJ7 301 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 OR8G5Q8NG78 346 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 STT3BQ8TCJ2 826 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 RNASEH2CQ8TDP1 164 aaKnown RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 LIN37Q96GY3 246 aaPredicted RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 TSSK2Q96PF2 358 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 GINS3Q9BRX5 216 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 VN1R1Q9GZP7 353 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 METTL8Q9H825 291 aaKnown RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 AKIRIN1Q9H9L7 192 aaPredicted RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 PNO1Q9NRX1 252 aaKnown RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 CGGBP1Q9UFW8 167 aaPredicted RBP9.76□□□□□ -0.85
TCF4-222ENST00000564228 MMACHCQ9Y4U1 282 aa9.76□□□□□ -0.85
TCF4-222ENST00000564228 CCDC187A0A096LP49 1063 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 SMCO3A2RU48 225 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 SPARCP09486 303 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 GABRA3P34903 492 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 EFNA3P52797 238 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 S100A10P60903 97 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 SUPT4H1P63272 117 aaKnown RBP9.75□□□□□ -0.85
TCF4-222ENST00000564228 ROM1Q03395 351 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 JOSD1Q15040 202 aaPredicted RBP9.75□□□□□ -0.85
TCF4-222ENST00000564228 NSDHLQ15738 373 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 ODF4Q2M2E3 257 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 ZNF679Q8IYX0 411 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 GVQW1Q8N7I0 195 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 OR4K15Q8NH41 348 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 R3HDM4Q96D70 268 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 SLC25A44Q96H78 314 aaPredicted RBP9.75□□□□□ -0.85
TCF4-222ENST00000564228 ELOVL3Q9HB03 270 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 FBLN5Q9UBX5 448 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 ZNF346Q9UL40 294 aaKnown RBP9.75□□□□□ -0.85
TCF4-222ENST00000564228 WASF3Q9UPY6 502 aa9.75□□□□□ -0.85
TCF4-222ENST00000564228 BORCS7-ASMTA0A0B4J1R7 106 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 C9J4A7 227 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 HRKO00198 91 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 NME2P1O60361 137 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 DEDDO75618 318 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 BPNT1O95861 308 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 IL2RGP31785 369 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 TMEM33P57088 247 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 NHLH1Q02575 133 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 TNFRSF9Q07011 255 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 ZNF616Q08AN1 781 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 MGAT2Q10469 447 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 SLC9A3R2Q15599 337 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 USF2Q15853 346 aaPredicted RBP9.74□□□□□ -0.85
TCF4-222ENST00000564228 ZNF141Q15928 474 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 GXYLT1Q4G148 440 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 ZAR1Q86SH2 424 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 CATSPERDQ86XM0 798 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 ZNF101Q8IZC7 436 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 OR52R1Q8NGF1 315 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 Q8WTZ3 238 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 ARSGQ96EG1 525 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
TCF4-222ENST00000564228 PACRGQ96M98 296 aaPredicted RBP9.74□□□□□ -0.85
TCF4-222ENST00000564228 SRA1Q9HD15 236 aaKnown RBP9.74□□□□□ -0.85
TCF4-222ENST00000564228 TUBD1Q9UJT1 453 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 MMP24Q9Y5R2 645 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 IGLV3-12A0A075B6K2 115 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 IGKV3D-11A0A0A0MRZ8 115 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 TMEM269A0A1B0GVZ9 245 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 A0A1W2PNU3 283 aaPredicted RBP9.74□□□□□ -0.85
TCF4-222ENST00000564228 MARCH11A6NNE9 402 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 C17orf105B2RV13 164 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 H3BSH0 61 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 HEXBP07686 556 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 DNASE1L1P49184 302 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 CTXN1P60606 82 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 HYAL4Q2M3T9 481 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 ALG10Q5BKT4 473 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 LANCL3Q6ZV70 420 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 FAM219AQ8IW50 185 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 JAGN1Q8N5M9 183 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 CHST4Q8NCG5 386 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 METTL21AQ8WXB1 218 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 CTHRC1Q96CG8 243 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 ACTR3CQ9C0K3 210 aaPredicted RBP9.74□□□□□ -0.85
TCF4-222ENST00000564228 SLC25A31Q9H0C2 315 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 NELFAQ9H3P2 528 aa9.74□□□□□ -0.85
TCF4-222ENST00000564228 ISG15P05161 165 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 GSTP1P09211 210 aaKnown RBP9.73□□□□□ -0.85
TCF4-222ENST00000564228 CXCL1P09341 107 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 FABP4P15090 132 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 P2RY1P47900 373 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 NOVA1P51513 510 aaKnown RBP9.73□□□□□ -0.85
TCF4-222ENST00000564228 QRFPP83859 136 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 ZNF74Q16587 644 aa9.73□□□□□ -0.85
TCF4-222ENST00000564228 MEP1BQ16820 701 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms