RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 WDR93Q6P2C0 686 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 Q6ZWC4 215 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 ZBTB46Q86UZ6 589 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 CALHM1Q8IU99 346 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 C11orf53Q8IXP5 236 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 C11orf65Q8NCR3 313 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 APOBEC3DQ96AK3 386 aaPredicted RBP7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 EBF4Q9BQW3 602 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 GGTLC1Q9BX51 225 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 PARD6BQ9BYG5 372 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 SLA2Q9H6Q3 261 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 EMC7Q9NPA0 242 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 ANGPT4Q9Y264 503 aa7.91□□□□□ -1.14
HDGFL3-204ENST00000563790 IGHV4-4A0A075B6R2 117 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 TMEM120BA0PK00 339 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 OR11H12B2RN74 326 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 C11orf94C9JXX5 98 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 HIST1H2ABP04908 130 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 TNFRSF1BP20333 461 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 MSR1P21757 451 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 RBM34P42696 430 aaKnown RBP7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 SLC18A1P54219 525 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 DLX6P56179 175 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 RPL27P61353 136 aaKnown RBP7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 CD47Q08722 323 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 SMARCD3Q6STE5 483 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 CCDC80Q76M96 950 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 HIST3H2AQ7L7L0 130 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 HDDC2Q7Z4H3 204 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 DPP10Q8N608 796 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 ANKRD42Q8N9B4 389 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 OR52L1Q8NGH7 329 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 HIST1H2ACQ93077 130 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 SGTBQ96EQ0 304 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 KAT8Q9H7Z6 458 aaKnown RBP7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 WDR76Q9H967 626 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 KRCC1Q9NPI7 259 aaPredicted RBP7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 CCDC167Q9P0B6 97 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 A4GNTQ9UNA3 340 aa7.9□□□□□ -1.14
HDGFL3-204ENST00000563790 POLR3GO15318 223 aaPredicted RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 RBP4P02753 201 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 DBHP09172 617 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 CD7P09564 240 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 ANOS1P23352 680 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 HTR1DP28221 377 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 GRK5P34947 590 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 IDH3AP50213 366 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 MTPNP58546 118 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 PIN1Q13526 163 aaPredicted RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 KRTAP27-1Q3LI81 207 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 CCDC92Q53HC0 331 aaPredicted RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 OTPQ5XKR4 325 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 LCN8Q6JVE9 175 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 WDR82Q6UXN9 313 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 Q8N402 240 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 ZNRF1Q8ND25 227 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 TMEM239Q8WW34 195 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 RAB3IPQ96QF0 476 aaPredicted RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 PAIP2Q9BPZ3 127 aaKnown RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 ALX4Q9H161 411 aaPredicted RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 SNTG1Q9NSN8 517 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 SLC2A8Q9NY64 477 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 VSX1Q9NZR4 365 aaPredicted RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 STX18Q9P2W9 335 aaKnown RBP7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 CORO2BQ9UQ03 480 aa7.89□□□□□ -1.15
HDGFL3-204ENST00000563790 IGHV4OR15-8A0A075B7B6 117 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 A0A087WW49 117 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 GMNCA6NCL1 334 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 IZUMO1RA6ND01 250 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 C12orf71A8MTZ7 269 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 H7C1C5 153 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 TGOLN2O43493 480 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 SGCEO43556 437 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 OR5F1O95221 314 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 CTLA4P16410 223 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 CTRB1P17538 263 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 LCN6P62502 163 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 HIST1H3AP68431 136 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 MXRA7P84157 204 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 TOP3AQ13472 1001 aaPredicted RBP7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 ZNF273Q14593 569 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 ALG10Q5BKT4 473 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 HIST2H3PS2Q5TEC6 136 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 CTRB2Q6GPI1 263 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 HIST2H3AQ71DI3 136 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 FAM122BQ7Z309 247 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 LAX1Q8IWV1 398 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 STPG3Q8N7X2 389 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 FAM156AQ8NDB6 213 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 TMEM185AQ8NFB2 350 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 TMEM163Q8TC26 289 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 DEFB104AQ8WTQ1 72 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 SPRYD4Q8WW59 207 aaPredicted RBP7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 CGREF1Q99674 301 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 KLK15Q9H2R5 256 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 RIMS3Q9UJD0 308 aa7.88□□□□□ -1.15
HDGFL3-204ENST00000563790 A0A1W2PPL8 197 aa7.87□□□□□ -1.15
HDGFL3-204ENST00000563790 EVPLLA8MZ36 301 aa7.87□□□□□ -1.15
HDGFL3-204ENST00000563790 RRP9O43818 475 aaKnown RBP7.87□□□□□ -1.15
HDGFL3-204ENST00000563790 NR2C1P13056 603 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms