RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 DSTNP60981 165 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 TFF3Q07654 80 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 STX5Q13190 355 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 SKP2Q13309 424 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 ATXN7L3Q14CW9 347 aaPredicted RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 MAPK14Q16539 360 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 CYBRD1Q53TN4 286 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 PAGE3Q5JUK9 113 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 PDZK1Q5T2W1 519 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 OR5M10Q6IEU7 315 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 TNFAIP8L2Q6P589 184 aaPredicted RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 ATRAIDQ6UW56 229 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 LRRC74BQ6ZQY2 392 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 ZNF621Q6ZSS3 439 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 TMUB2Q71RG4 321 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 CCDC80Q76M96 950 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 OLIG3Q7RTU3 272 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 BIVMQ86UB2 503 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 GTPBP8Q8N3Z3 284 aaPredicted RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 GATSQ8NAP1 163 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 C10orf82Q8WW14 230 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 RPL3LQ92901 407 aaKnown RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 LHX4Q969G2 390 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 C11orf52Q96A22 123 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 CHMP6Q96FZ7 201 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 AURKBQ96GD4 344 aaPredicted RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 TRNT1Q96Q11 434 aaKnown RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 KLHDC3Q9BQ90 382 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 CHRDL1Q9BU40 450 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 MOB1AQ9H8S9 216 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 Q9HAA7 133 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 TPT1P8Q9HAU6 139 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 NRN1Q9NPD7 142 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 EXOSC3Q9NQT5 275 aaKnown RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 PRR34Q9NV39 138 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 THUMPD1Q9NXG2 353 aaKnown RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 MRPL39Q9NYK5 338 aaKnown RBP3.78□□□□□ -1.8
LINC00254-201ENST00000563416 SLC25A37Q9NYZ2 338 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 MED11Q9P086 117 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 VAPAQ9P0L0 249 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 ONECUT1Q9UBC0 465 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 CLCF1Q9UBD9 225 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 DKKL1Q9UK85 242 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 SLC35A3Q9Y2D2 325 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 AKAP9Q99996 3911 aa3.78□□□□□ -1.8
LINC00254-201ENST00000563416 PLCE1Q9P212 2302 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 SNTNA6NMZ2 147 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 H3BNH8 94 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 FAAHO00519 579 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 DYNC1I1O14576 645 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 H6PDO95479 791 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 DBIP07108 87 aaKnown RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 TFPTP0C1Z6 253 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 HSMCR30P0CW71 290 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 GPX2P18283 190 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 PPIBP23284 216 aaKnown RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 EIF1P41567 113 aaKnown RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 STARP49675 285 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 ZNF136P52737 540 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 CRISP3P54108 245 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 FOXF1Q12946 379 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 RGNQ15493 299 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 NDUFAF6Q330K2 333 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 FBXL19-AS1Q494R0 122 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 COQ5Q5HYK3 327 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 RAET1LQ5VY80 246 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 CARD17Q5XLA6 110 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 FAM71F2Q6NXP2 309 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 EIF3MQ7L2H7 374 aaKnown RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 DHDDSQ86SQ9 333 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 MOB3BQ86TA1 216 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 TMEM123Q8N131 208 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 C10orf111Q8N326 155 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 OR1K1Q8NGR3 316 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 OR5W2Q8NH69 310 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 LILRB4Q8NHJ6 448 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 GPR119Q8TDV5 335 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 ST8SIA1Q92185 356 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 C1orf147Q96MC9 270 aaPredicted RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 RNF145Q96MT1 663 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 ZFP3Q96NJ6 502 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 COMMD4Q9H0A8 199 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 IKZF5Q9H5V7 419 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 TMEM38AQ9H6F2 299 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 SP140LQ9H930 580 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 BCL2L10Q9HD36 194 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 RAB18Q9NP72 206 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 SAR1AQ9NR31 198 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 DCAF13Q9NV06 445 aaKnown RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 CALML5Q9NZT1 146 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 EIF3KQ9UBQ5 218 aaKnown RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 ZNF629Q9UEG4 869 aaPredicted RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 NDUFAF1Q9Y375 327 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 EXOSC1Q9Y3B2 195 aaKnown RBP3.77□□□□□ -1.81
LINC00254-201ENST00000563416 ZNF337Q9Y3M9 751 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 AKAP6Q13023 2319 aa3.77□□□□□ -1.81
LINC00254-201ENST00000563416 CELSR1Q9NYQ6 3014 aa3.76□□□□□ -1.81
LINC00254-201ENST00000563416 ALPK2Q86TB3 2170 aa3.76□□□□□ -1.81
LINC00254-201ENST00000563416 POLQO75417 2590 aa3.76□□□□□ -1.81
LINC00254-201ENST00000563416 MYO9AB2RTY4 2548 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms