RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 RAB40AQ8WXH6 277 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 GGHQ92820 318 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 DACT3Q96B18 629 aaPredicted RBP13.76□□□□□ -0.21
CDT1-202ENST00000562747 MRI1Q9BV20 369 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 COMMD4Q9H0A8 199 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 WDR13Q9H1Z4 485 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 PLCXD1Q9NUJ7 323 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 CNOT2Q9NZN8 540 aaKnown RBP13.76□□□□□ -0.21
CDT1-202ENST00000562747 OPN4Q9UHM6 478 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 POLDIP2Q9Y2S7 368 aa13.76□□□□□ -0.21
CDT1-202ENST00000562747 DOCK11Q5JSL3 2073 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 LOC105371242A0A075B767 164 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 EFCAB10A6NFE3 127 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 E9PI62 339 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 NOS1APO75052 506 aaPredicted RBP13.75□□□□□ -0.21
CDT1-202ENST00000562747 ZNF20P17024 532 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 MPZP25189 248 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 FUT6P51993 359 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 AQP4P55087 323 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 PAX8Q06710 450 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 CCDC58Q4VC31 144 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 LAIR2Q6ISS4 152 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 UTS2BQ765I0 119 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 POC1AQ8NBT0 407 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 OR13C3Q8NGS6 347 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 OR5AK2Q8NH90 309 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 NANPQ8TBE9 248 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 TMIGD2Q96BF3 282 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 SEH1LQ96EE3 360 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 ADAT3Q96EY9 351 aaPredicted RBP13.75□□□□□ -0.21
CDT1-202ENST00000562747 PKIBQ9C010 78 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 CHCHD3Q9NX63 227 aaKnown RBP13.75□□□□□ -0.21
CDT1-202ENST00000562747 NLKQ9UBE8 527 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 AUP1Q9Y679 476 aa13.75□□□□□ -0.21
CDT1-202ENST00000562747 TRBV2A0A0J9YWF9 115 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 KIR2DS1A0A191URI9 304 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 TMEM89A2RUT3 159 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 DVL1O14640 695 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 ENSAO43768 121 aaKnown RBP13.74□□□□□ -0.21
CDT1-202ENST00000562747 ZFPL1O95159 310 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 ACAA1P09110 424 aaPredicted RBP13.74□□□□□ -0.21
CDT1-202ENST00000562747 PGA5P0DJD9 388 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 HILS1P60008 231 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 GMFBP60983 142 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 ST3GAL4Q11206 333 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 RPL22L1Q6P5R6 122 aaKnown RBP13.74□□□□□ -0.21
CDT1-202ENST00000562747 DNAAF1Q8NEP3 725 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 OR51A4Q8NGJ6 313 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 OR52N1Q8NH53 320 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 ANGPTL6Q8NI99 470 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 TRMT10AQ8TBZ6 339 aaKnown RBP13.74□□□□□ -0.21
CDT1-202ENST00000562747 FGGYQ96C11 551 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 CCL13Q99616 98 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 NUDT16L1Q9BRJ7 211 aaKnown RBP13.74□□□□□ -0.21
CDT1-202ENST00000562747 SMURF1Q9HCE7 757 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 PSORS1C1Q9UIG5 152 aa13.74□□□□□ -0.21
CDT1-202ENST00000562747 WNK2Q9Y3S1 2297 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 FAM230AA0A1W2PPH8 454 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 NKX6-3A6NJ46 265 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 OR2AT4A6NND4 320 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 GPR37O15354 613 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 SYNGR1O43759 233 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 XPNPEP2O43895 674 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 ECDO95905 644 aaPredicted RBP13.73□□□□□ -0.21
CDT1-202ENST00000562747 PPIAL4GP0DN37 164 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 ATF1P18846 271 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 EPHA1P21709 976 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 IL24Q13007 206 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 RIPK1Q13546 671 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 OR2G6Q5TZ20 316 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 ZNF788Q6ZQV5 615 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 CALHM1Q8IU99 346 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 C3orf56Q8N813 242 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 BPIFB6Q8NFQ5 453 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 OR5T2Q8NGG2 359 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 OR10AC1Q8NH08 325 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 RPS4Y2Q8TD47 263 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 ZNF418Q8TF45 676 aaPredicted RBP13.73□□□□□ -0.21
CDT1-202ENST00000562747 NPRL2Q8WTW4 380 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 FAM216AQ8WUB2 273 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 BORCS8Q96FH0 119 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 PDCD1LG2Q9BQ51 273 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 SNTG1Q9NSN8 517 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 BABAM2Q9NXR7 383 aa13.73□□□□□ -0.21
CDT1-202ENST00000562747 C22orf46C9J442 243 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 NDUFB3O43676 98 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 FSHBP01225 129 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 LIPFP07098 398 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 ADRA2CP18825 462 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 AMY2BP19961 511 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 PRKACBP22694 351 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 RBP2P50120 134 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 GTF2A1P52655 376 aaPredicted RBP13.72□□□□□ -0.21
CDT1-202ENST00000562747 CDK5R1Q15078 307 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 SMIM21Q3B7S5 101 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 LRRC10Q5BKY1 277 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 ACP7Q6ZNF0 438 aa13.72□□□□□ -0.21
CDT1-202ENST00000562747 GCDHQ92947 438 aaPredicted RBP13.72□□□□□ -0.21
CDT1-202ENST00000562747 SPSB1Q96BD6 273 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms