RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 IGFLR1Q9H665 355 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 ZNF703Q9H7S9 590 aaPredicted RBP4.35□□□□□ -1.71
TCF4-215ENST00000562638 TAF9BQ9HBM6 251 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 TMEM9BQ9NQ34 198 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 HINT3Q9NQE9 182 aaKnown RBP4.35□□□□□ -1.71
TCF4-215ENST00000562638 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.35□□□□□ -1.71
TCF4-215ENST00000562638 NECAP2Q9NVZ3 263 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 PLA2G3Q9NZ20 509 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 COMMD9Q9P000 198 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 MARCH4Q9P2E8 410 aaPredicted RBP4.35□□□□□ -1.71
TCF4-215ENST00000562638 LRIT1Q9P2V4 623 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 ZNF70Q9UC06 446 aaPredicted RBP4.35□□□□□ -1.71
TCF4-215ENST00000562638 TRAPPC2LQ9UL33 140 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 MCTS1Q9ULC4 181 aaKnown RBP4.35□□□□□ -1.71
TCF4-215ENST00000562638 SLC7A7Q9UM01 511 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 PLAGL1Q9UM63 463 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 ICAM5Q9UMF0 924 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 BOKQ9UMX3 212 aaPredicted RBP4.35□□□□□ -1.71
TCF4-215ENST00000562638 DAPP1Q9UN19 280 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 FZD1Q9UP38 647 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 YIPF1Q9Y548 306 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 MEGF6O75095 1541 aa4.35□□□□□ -1.71
TCF4-215ENST00000562638 A0A0G2JMM0 328 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 A0A1W2PPB8 328 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 C17orf102A2RUQ5 167 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 MBLAC1A4D2B0 266 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 GAGE12HA6NDE8 117 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ZNF705FA8MVS1 300 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 KIR3DP1A8MWS1 328 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 TMEM229AB2RXF0 380 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 H0Y980 276 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 GAPDHSO14556 408 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 P2RX6O15547 441 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ZNF354AO60765 605 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 UPK3AO75631 287 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 CEACAM4O75871 244 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 TUSC2O75896 110 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 RCBTB2O95199 551 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 HAND1O96004 215 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 NRASP01111 189 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 IL2RAP01589 272 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 SERPINA7P05543 415 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 CTSLP07711 333 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 PFN1P07737 140 aaKnown RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 CHRM2P08172 466 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 FURINP09958 794 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ZNF705DP0CH99 300 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 ZNF705BP0CI00 300 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 LIMS3P0CW19 117 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 LIMS4P0CW20 117 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ERGP11308 486 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 EPCAMP16422 314 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 FUT3P21217 361 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ATP6V0CP27449 155 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 SERPINA4P29622 427 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 HOXC9P31274 260 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ARL2P36404 184 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ACVR1BP36896 505 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 PPICP45877 212 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 PRLHRP49683 370 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ATP1B3P54709 279 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 MFAP4P55083 255 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 UCNP55089 124 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 PAX9P55771 341 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 WDR5P61964 334 aaKnown RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 SNRPNP63162 240 aaKnown RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 MRPS34P82930 218 aaKnown RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 HIST1H1AQ02539 215 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 RAB40BQ12829 278 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 EXOSC7Q15024 291 aaKnown RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 RAB30Q15771 203 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 GABRA6Q16445 453 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 POU2AF1Q16633 256 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 SOHLH1Q5JUK2 328 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ACTL10Q5JWF8 245 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 WIPI1Q5MNZ9 446 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 SPSB3Q6PJ21 355 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 NPNTQ6UXI9 565 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 UNQ6126/PRO20091Q6UXV3 157 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 Q6ZRG5 221 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 H1FNTQ75WM6 255 aaPredicted RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 COX15Q7KZN9 410 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 CPEB2Q7Z5Q1 589 aaKnown RBP4.34□□□□□ -1.71
TCF4-215ENST00000562638 TMEM130Q8N3G9 435 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 TMEM217Q8N7C4 229 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ZIC4Q8N9L1 334 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 OR4K17Q8NGC6 315 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 OR4F5Q8NH21 305 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 NFKBIDQ8NI38 313 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 MARCH1Q8TCQ1 289 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 PPCDCQ96CD2 204 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 RNF183Q96D59 192 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 SDSLQ96GA7 329 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 MACROD1Q9BQ69 325 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 ZNF649Q9BS31 505 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 PIMREGQ9BSJ6 248 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 TMEM133Q9H2Q1 129 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 RAB9BQ9NP90 201 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 MED29Q9NX70 200 aa4.34□□□□□ -1.71
TCF4-215ENST00000562638 HSPB8Q9UJY1 196 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms