RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 ALKAL1Q6UXT8 129 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 UNQ6126/PRO20091Q6UXV3 157 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 MBOAT2Q6ZWT7 520 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 MEPCEQ7L2J0 689 aaKnown RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 PRSS45Q7RTY3 260 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 C6orf120Q7Z4R8 191 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 RBM23Q86U06 439 aaKnown RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 P2RY8Q86VZ1 359 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 IFNEQ86WN2 208 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 FBXO16Q8IX29 292 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 SLC39A11Q8N1S5 342 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 Q8N1Y9 231 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 MDS2Q8NDY4 140 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 OR13C6PQ8NH95 151 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 EEF1AKMT1Q8WVE0 214 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 LCN9Q8WX39 176 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 MRPS31Q92665 395 aaKnown RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 IMP4Q96G21 291 aaKnown RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 TIMD4Q96H15 378 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF419Q96HQ0 510 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 DEFB118Q96PH6 123 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 UHRF2Q96PU4 802 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 MARVELD1Q9BSK0 173 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 RSPO3Q9BXY4 272 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 CIPCQ9C0C6 399 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 OR11A1Q9GZK7 315 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 VN1R1Q9GZP7 353 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 FAM49AQ9H0Q0 323 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 C20orf85Q9H1P6 137 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 SLC25A51Q9H1U9 297 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 CXCL16Q9H2A7 254 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 MAGIXQ9H6Y5 334 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 TMEM74BQ9NUR3 256 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 MRPS18AQ9NVS2 196 aaKnown RBP4.79□□□□□ -1.64
CAPN3-211ENST00000562199 IL17CQ9P0M4 197 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 OR1A1Q9P1Q5 309 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 BTRCQ9Y297 605 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 FAM96BQ9Y3D0 163 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 NEUROG3Q9Y4Z2 214 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 SNX10Q9Y5X0 201 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 U3KQ87 197 aa4.79□□□□□ -1.64
CAPN3-211ENST00000562199 OTOFQ9HC10 1997 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 NYNRINQ9P2P1 1898 aaKnown RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 A0A0A6YYD5 115 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TRAV39A0A0B4J263 110 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 IGHV2-70DA0A0C4DH43 119 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 A0A0G2JN53 185 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TRBV4-1A0A0J9YWV2 114 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 LOC100130705A0A1B0GUX0 176 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 A0A1W2PPK0 400 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TMEM218A2RU14 115 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 LRP5LA4QPB2 252 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 LRRC30A6NM36 301 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 FAM220BPB1ANY3 271 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF587BE7ETH6 402 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 AP4M1O00189 453 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CHEK1O14757 476 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 SYT7O43581 403 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ZG16O60844 167 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 KCNK2O95069 426 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CDS2O95674 445 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 NUDT3O95989 172 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 NGFRP08138 427 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 FGF2P09038 288 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 LINC00032P0C843 101 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 SP9P0CG40 484 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CYBAP13498 195 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 BRS3P32247 399 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 DIO3P55073 304 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 DLX6P56179 175 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ISL1P61371 349 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 RHOBP62745 196 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 RPL8P62917 257 aaKnown RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 SLC35A2P78381 396 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TIAL1Q01085 375 aaKnown RBP eCLIP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 EWSR1Q01844 656 aaKnown RBP eCLIP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CRYZQ08257 329 aaKnown RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 FAM74A1Q5RGS3 127 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 AKR1C8PQ5T2L2 129 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CPTPQ5TA50 214 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 TMEM236Q5W0B7 351 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 HIST2H2BCQ6DN03 193 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 HIST2H2BDQ6DRA6 164 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 HIST2H2AA3Q6FI13 130 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 KIRREL2Q6UWL6 708 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 PAMR1Q6UXH9 720 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 WDR82Q6UXN9 313 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 GSG1LQ6UXU4 331 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF517Q6ZMY9 492 aaPredicted RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 Q6ZT83 130 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 RNF144BQ7Z419 303 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 DND1Q8IYX4 353 aaKnown RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CLDN19Q8N6F1 224 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 UBAC2Q8NBM4 344 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 CHST4Q8NCG5 386 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 ZNF548Q8NEK5 533 aaPredicted RBP4.78□□□□□ -1.64
CAPN3-211ENST00000562199 VN1R2Q8NFZ6 395 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 OR4F6Q8NGB9 312 aa4.78□□□□□ -1.64
CAPN3-211ENST00000562199 OR52B6Q8NGF0 335 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms