RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 TSC22D1Q15714 1073 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 TCF24Q7RTU0 167 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 TMEM144Q7Z5S9 345 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 KATNAL2Q8IYT4 538 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 ZNF649Q9BS31 505 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 AHSPQ9NZD4 102 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 NSD2O96028 1365 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 SPATA31E1Q6ZUB1 1445 aa1.81□□□□□ -2.12
USP8-218ENST00000561330 BAZ1BQ9UIG0 1483 aaKnown RBP1.81□□□□□ -2.12
USP8-218ENST00000561330 IGKV1OR2-108A0A075B7D4 117 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 SERTM2A0A1B0GWG4 89 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 SLC22A20A6NK97 555 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 H3BN98 237 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 GOLGA8TH3BQL2 631 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 CASQ2O14958 399 aaPredicted RBP1.8□□□□□ -2.12
USP8-218ENST00000561330 SIVA1O15304 175 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 SLC6A1P30531 599 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 ATP6V0D1P61421 351 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 RAB11AP62491 216 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 PAFAH1B2P68402 229 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 C2orf54Q08AI8 447 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 TPBGQ13641 420 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 TPRG1LQ5T0D9 272 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 THOC7Q6I9Y2 204 aaKnown RBP1.8□□□□□ -2.12
USP8-218ENST00000561330 SPNS3Q6ZMD2 512 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 EIF4E3Q8N5X7 224 aaKnown RBP1.8□□□□□ -2.12
USP8-218ENST00000561330 TRAM1L1Q8N609 369 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 COMMD1Q8N668 190 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 ZDHHC22Q8N966 263 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 CYB561A3Q8NBI2 242 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 ISOC2Q96AB3 205 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 MTG1Q9BT17 334 aaPredicted RBP1.8□□□□□ -2.12
USP8-218ENST00000561330 OR51B5Q9H339 312 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 TMEM38BQ9NVV0 291 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 ACOT9Q9Y305 439 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 TRAPPC1Q9Y5R8 145 aa1.8□□□□□ -2.12
USP8-218ENST00000561330 C9JQL5 133 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 CTAG2O75638 210 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 PTTG1O95997 202 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 CDK1P06493 297 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 SNRPAP09012 282 aaKnown RBP1.79□□□□□ -2.12
USP8-218ENST00000561330 GALP22466 123 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 TEAD1P28347 426 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 GNRHRP30968 328 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 LAMTOR4Q0VGL1 99 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 LGALSLQ3ZCW2 172 aaPredicted RBP1.79□□□□□ -2.12
USP8-218ENST00000561330 CPNE9Q8IYJ1 553 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 Q8NDZ9 215 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 PPP1R36Q96LQ0 422 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 ZNF75AQ96N20 296 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 CYP3A43Q9HB55 503 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 ICOSQ9Y6W8 199 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 PLEKHG2Q9H7P9 1386 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 PRR14LQ5THK1 2151 aa1.79□□□□□ -2.12
USP8-218ENST00000561330 ITGB4P16144 1822 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 GMNCA6NCL1 334 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 J3QT63 122 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 NDUFS5O43920 106 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 IGHV3-53P01767 116 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 TTC19Q6DKK2 380 aaPredicted RBP1.78□□□□□ -2.12
USP8-218ENST00000561330 FAM43BQ6ZT52 329 aaPredicted RBP1.78□□□□□ -2.12
USP8-218ENST00000561330 COMTD1Q86VU5 262 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 CMTM8Q8IZV2 173 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 RPRMLQ8N4K4 120 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 OR5H2Q8NGV7 314 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 TMEM234Q8WY98 164 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 GABRG3Q99928 467 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 THTPAQ9BU02 230 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 MRPL20Q9BYC9 149 aaKnown RBP1.78□□□□□ -2.12
USP8-218ENST00000561330 VPS37BQ9H9H4 285 aa1.78□□□□□ -2.12
USP8-218ENST00000561330 IGHV2OR16-5A0A0B4J2B6 119 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 SUPT3HB4E1H0 165 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 GGTLC3B5MD39 225 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 DFFAO00273 331 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 TRDMT1O14717 391 aaKnown RBP1.77□□□□□ -2.13
USP8-218ENST00000561330 RGS5O15539 181 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 GCGP01275 180 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 ANXA8P13928 327 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 CD99P14209 185 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 CBR1P16152 277 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 ZNF708P17019 499 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 ENDOGQ14249 297 aaKnown RBP1.77□□□□□ -2.13
USP8-218ENST00000561330 ELOCQ15369 112 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 LINC00303Q3SY05 128 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 ANXA8L1Q5VT79 327 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 KCTD16Q68DU8 428 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 FAM231DQ6ZW35 169 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 NAT6Q93015 286 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 FXYD5Q96DB9 178 aa1.77□□□□□ -2.13
USP8-218ENST00000561330 IQCGQ9H095 443 aaKnown RBP1.77□□□□□ -2.13
USP8-218ENST00000561330 MYBPHLA2RUH7 354 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 TRIM64CA6NLI5 447 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 PSCAO43653 123 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 CDS2O95674 445 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 PTHLHP12272 177 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 PAX6P26367 422 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 CFHR2P36980 270 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 KRTAP13-4Q3LI77 160 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 MLIPQ5VWP3 458 aa1.76□□□□□ -2.13
USP8-218ENST00000561330 OR8A1Q8NGG7 326 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms