RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 LAP3P28838 519 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 SDHAP31040 664 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 RCVRNP35243 200 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 APLNRP35414 380 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 RAD52P43351 418 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 GDI2P50395 445 aaKnown RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 RAP2BP61225 183 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 LMO4P61968 165 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 RPS11P62280 158 aaKnown RBP eCLIP5.84□□□□□ -1.47
SPG11-224ENST00000561268 HIST1H3AP68431 136 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 PLP2Q04941 152 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 EGR3Q06889 387 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 GRK1Q15835 563 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 KCNMB1Q16558 191 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 CARTPTQ16568 116 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 CR1LQ2VPA4 569 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 KRTAP27-1Q3LI81 207 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 KRTAP24-1Q3LI83 254 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 Q5BKY6 102 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 ZNF684Q5T5D7 378 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 C6orf183Q5T699 404 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 HIST2H3PS2Q5TEC6 136 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 GPR139Q6DWJ6 353 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 HIST2H3AQ71DI3 136 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 NR2C2APQ86WQ0 139 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 LINC01356Q8N9X3 169 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 BBS1Q8NFJ9 593 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 OR10H4Q8NGA5 316 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 OR4M1Q8NGD0 313 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 CLDND2Q8NHS1 167 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 SYNPRQ8TBG9 265 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 GPR148Q8TDV2 347 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 HAVCR1Q96D42 359 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 PELI1Q96FA3 418 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 S100A16Q96FQ6 103 aaKnown RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 C4orf36Q96KX1 117 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 Q96M85 177 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 ERMAPQ96PL5 475 aaPredicted RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 OR2A7Q96R45 310 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 ABHD1Q96SE0 405 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 SHARPINQ9H0F6 387 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 HDHD2Q9H0R4 259 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 SLITRK2Q9H156 845 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 ALX4Q9H161 411 aaPredicted RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 ISG20L2Q9H9L3 353 aaKnown RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 GPN1Q9HCN4 374 aaPredicted RBP5.84□□□□□ -1.47
SPG11-224ENST00000561268 SLCO1C1Q9NYB5 712 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 KIF25Q9UIL4 384 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 ZNF281Q9Y2X9 895 aa5.84□□□□□ -1.47
SPG11-224ENST00000561268 ANK2Q01484 3957 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 IGLV1-36A0A0B4J1U3 117 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 TRBV5-5A0A0J9YX44 114 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 ANKRD20A5PA0PJZ0 165 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 ZSCAN5BA6NJL1 495 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 B4DSR2 109 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 FAM157AC9JC47 383 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 LYNX1G3V0Z9 82 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 WNT9BO14905 357 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 FABP7O15540 132 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 SLC22A5O76082 557 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 LYNX1P0DP58 116 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 NAT2P11245 290 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 SRD5A1P18405 259 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 SRMP19623 302 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 HNF1AP20823 631 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 KITLGP21583 273 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 TUBG1P23258 451 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 NOS3P29474 1203 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 MPV17P39210 176 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 HTR2BP41595 481 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 MAGEB1P43366 347 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 GPR6P46095 362 aaPredicted RBP5.83□□□□□ -1.48
SPG11-224ENST00000561268 TMEM33P57088 247 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 PCBD1P61457 104 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 LSM6P62312 80 aaKnown RBP5.83□□□□□ -1.48
SPG11-224ENST00000561268 ERVK-25P63136 954 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 SCRN3Q0VDG4 424 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 Q499Y3 187 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 ARL9Q6T311 187 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 SLC16A9Q7RTY1 509 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 MEX3DQ86XN8 651 aaKnown RBP5.83□□□□□ -1.48
SPG11-224ENST00000561268 LRRC18Q8N456 261 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 NPEPL1Q8NDH3 523 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 ZNF680Q8NEM1 530 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 SEMA6DQ8NFY4 1073 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 OR1J1Q8NGS3 322 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 OR51A7Q8NH64 312 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 SLC25A40Q8TBP6 338 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 KLF14Q8TD94 323 aaPredicted RBP5.83□□□□□ -1.48
SPG11-224ENST00000561268 ZNF431Q8TF32 576 aaPredicted RBP5.83□□□□□ -1.48
SPG11-224ENST00000561268 SNX33Q8WV41 574 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 FCAMRQ8WWV6 532 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 ASB17Q8WXJ9 295 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 GTF3AQ92664 365 aaKnown RBP5.83□□□□□ -1.48
SPG11-224ENST00000561268 SNAPC3Q92966 411 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 PTX4Q96A99 478 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 RASD2Q96D21 266 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 DMRTB1Q96MA1 342 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 G6PC2Q9NQR9 355 aa5.83□□□□□ -1.48
SPG11-224ENST00000561268 TUBG2Q9NRH3 451 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms