RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
TPM1-230ENST00000561266 ZNF222Q9UK12 451 aa11.53□□□□□ -0.56
TPM1-230ENST00000561266 HHLA2Q9UM44 414 aa11.53□□□□□ -0.56
TPM1-230ENST00000561266 EXOSC1Q9Y3B2 195 aaKnown RBP11.53□□□□□ -0.56
TPM1-230ENST00000561266 SOX21Q9Y651 276 aaPredicted RBP11.53□□□□□ -0.56
TPM1-230ENST00000561266 IGHV2-70DA0A0C4DH43 119 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 TRBV2A0A0J9YWF9 115 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 H0YHG0 523 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 J3QT63 122 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 TMPRSS2O15393 492 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 OGG1O15527 345 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 INMTO95050 263 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 PGA5P0DJD9 388 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 PSG2P11465 335 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 ATF1P18846 271 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 GLRA1P23415 457 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 MPZP25189 248 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 CEBPDP49716 269 aaPredicted RBP11.52□□□□□ -0.57
TPM1-230ENST00000561266 ERVK11-1P61568 191 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 DGUOKQ16854 277 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 MICBQ29980 383 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 KRTAP21-3Q3LHN1 58 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 ATPAF1Q5TC12 328 aaPredicted RBP11.52□□□□□ -0.57
TPM1-230ENST00000561266 IZUMO2Q6UXV1 221 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 ACP7Q6ZNF0 438 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 ZNF788Q6ZQV5 615 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 EGFL6Q8IUX8 553 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 CD177Q8N6Q3 437 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 POC1AQ8NBT0 407 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 OR13C3Q8NGS6 347 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 OR5AK2Q8NH90 309 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 RAB40AQ8WXH6 277 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 ORAI1Q96D31 301 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 TECTBQ96PL2 329 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 SPACA5Q96QH8 159 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 PLEKHA1Q9HB21 404 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 MTCH1Q9NZJ7 389 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 CNOT2Q9NZN8 540 aaKnown RBP11.52□□□□□ -0.57
TPM1-230ENST00000561266 ATRQ13535 2644 aa11.52□□□□□ -0.57
TPM1-230ENST00000561266 KIR2DS1A0A191URI9 304 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 OR2AT4A6NND4 320 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 SLC1A7O00341 560 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 NOS1APO75052 506 aaPredicted RBP11.51□□□□□ -0.57
TPM1-230ENST00000561266 PLATP00750 562 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 MYF6P23409 242 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 IKZF1Q13422 519 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 DMKNQ6E0U4 476 aaPredicted RBP11.51□□□□□ -0.57
TPM1-230ENST00000561266 UTS2BQ765I0 119 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 NLRC3Q7RTR2 1065 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 C1QL2Q7Z5L3 287 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 CCDC54Q8NEL0 328 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 ZNF671Q8TAW3 534 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 SLAMF9Q96A28 289 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 RFT1Q96AA3 541 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 MRPL48Q96GC5 212 aaKnown RBP11.51□□□□□ -0.57
TPM1-230ENST00000561266 MDFIQ99750 246 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 NKX3-1Q99801 234 aaPredicted RBP11.51□□□□□ -0.57
TPM1-230ENST00000561266 NRIP2Q9BQI9 281 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 NUDT16L1Q9BRJ7 211 aaKnown RBP11.51□□□□□ -0.57
TPM1-230ENST00000561266 ELL3Q9HB65 397 aaPredicted RBP11.51□□□□□ -0.57
TPM1-230ENST00000561266 HES4Q9HCC6 221 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 BABAM2Q9NXR7 383 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 NLKQ9UBE8 527 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 IL36RNQ9UBH0 155 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 DNAJB11Q9UBS4 358 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 OR5V1Q9UGF6 321 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 MAB21L2Q9Y586 359 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 DSCAML1Q8TD84 2053 aa11.51□□□□□ -0.57
TPM1-230ENST00000561266 IGHV3OR16-10A0A075B7F0 116 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 IGKV1-12A0A0C4DH73 117 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 IRGMA1A4Y4 181 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 TMEM212A6NML5 194 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 PTGES3LE9PB15 166 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 J3QLI3 93 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 NDUFA2O43678 99 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 IGKV1D-12P01611 117 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 CDK1P06493 297 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 CALCBP10092 127 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 MYL12AP19105 171 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 HNF1AP20823 631 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 CPT2P23786 658 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 AZGP1P25311 298 aaKnown RBP11.5□□□□□ -0.57
TPM1-230ENST00000561266 SRP14P37108 136 aaKnown RBP11.5□□□□□ -0.57
TPM1-230ENST00000561266 NPBWR2P48146 333 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 SOX2P48431 317 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 FUT6P51993 359 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 RPS11P62280 158 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM1-230ENST00000561266 RPL22L1Q6P5R6 122 aaKnown RBP11.5□□□□□ -0.57
TPM1-230ENST00000561266 TMPRSS11AQ6ZMR5 421 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 BTN2A1Q7KYR7 527 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 ZNF573Q86YE8 665 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 NANOGP1Q8N7R0 232 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 ZNRF1Q8ND25 227 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 OR13C9Q8NGT0 318 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 OR52N1Q8NH53 320 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 PP6455Q8WZ26 134 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 ST8SIA4Q92187 359 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 TMIGD2Q96BF3 282 aa11.5□□□□□ -0.57
TPM1-230ENST00000561266 C12orf43Q96C57 262 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms