RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 TMEM246Q9BRR3 403 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 CCDC90BQ9GZT6 254 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 DNTTIP1Q9H147 329 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF665Q9H7R5 613 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 NEK6Q9HC98 313 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 RASL12Q9NYN1 266 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 KAAG1Q9UBP8 84 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 MIOXQ9UGB7 285 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 POLDIP2Q9Y2S7 368 aa8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 SF3B6Q9Y3B4 125 aaKnown RBP8.06□□□□□ -1.12
RABGGTA-221ENST00000561055 NSD1Q96L73 2696 aaPredicted RBP8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 hCG_1807616A0A1W2PRN6 198 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 A8MXK9 166 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 B4DSR2 109 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF879B4DU55 563 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 RHBDL1O75783 438 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 LY6G6DO95868 133 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 OCM2P0CE71 109 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 EGR1P18146 543 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 ERVK11-1P61568 191 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 FAM201AQ5SY85 155 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 UBE2UQ5VVX9 321 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 CYB5R2Q6BCY4 276 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF773Q6PK81 442 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF367Q7RTV3 350 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 FAM90A1Q86YD7 464 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 CDH26Q8IXH8 852 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 PHC2Q8IXK0 858 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 SAXO1Q8IYX7 474 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 LINC01356Q8N9X3 169 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 FCGR1BQ92637 280 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 UFD1Q92890 307 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 MSI2Q96DH6 328 aaKnown RBP8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 DERL3Q96Q80 235 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 METTL17Q9H7H0 456 aaPredicted RBP8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 SEBOXQ9HB31 216 aaPredicted RBP8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 RHOFQ9HBH0 211 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 HES4Q9HCC6 221 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 FOXJ3Q9UPW0 622 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 LRCH1Q9Y2L9 728 aa8.05□□□□□ -1.12
RABGGTA-221ENST00000561055 HIVEP2P31629 2446 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 PPIAL4CA0A0B4J2A2 164 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 FAM230AA0A1W2PPH8 454 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 ISPDA4D126 451 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 CEACAM18A8MTB9 384 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 FAM157AC9JC47 383 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 PIN1P1O15428 100 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 CD37P11049 281 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 RAB3AP20336 220 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 PSMA1P25786 263 aaKnown RBP8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 MAPK3P27361 379 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 MAP2K4P45985 399 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 SOX2P48431 317 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 DVL1P1P54792 670 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 MTCP1P56278 107 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 PDZK1IP1Q13113 114 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 KISS1Q15726 138 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 MICBQ29980 383 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 ACSM3Q53FZ2 586 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 LIPKQ5VXJ0 399 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 STUMQ69YW2 141 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 SFRP4Q6FHJ7 346 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 CLEC9AQ6UXN8 241 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF841Q6ZN19 808 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 ANGPTL5Q86XS5 388 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 MKXQ8IYA7 352 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 Q8IYB0 196 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 ZSCAN4Q8NAM6 433 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 OR13C5Q8NGS8 318 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 OR13C9Q8NGT0 318 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 TRMT10AQ8TBZ6 339 aaKnown RBP8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 PHYHIPQ92561 330 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 NEIL1Q96FI4 390 aaPredicted RBP8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 OR14A2Q96R54 314 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 SMR3AQ99954 134 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 NRIP2Q9BQI9 281 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 WDR13Q9H1Z4 485 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 TMEM138Q9NPI0 162 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 TMEM160Q9NX00 188 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 MTCH1Q9NZJ7 389 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 PCDHB10Q9UN67 800 aa8.04□□□□□ -1.12
RABGGTA-221ENST00000561055 PNMA8CA0A1B0GUJ8 204 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 TRIM64CA6NLI5 447 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 C3orf80F5H4A9 247 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 AKR7A2O43488 359 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 SYNGR1O43759 233 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 FOXH1O75593 365 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 ZNF205O95201 554 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 TNFAIP8O95379 198 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 MSMBP08118 114 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 AMY2BP19961 511 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 GALP22466 123 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 GLRA1P23415 457 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 CD80P33681 288 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 TGFBR2P37173 567 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 NPY4RP50391 375 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 GP2P55259 537 aaKnown RBP8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 ZP1P60852 638 aa8.03□□□□□ -1.12
RABGGTA-221ENST00000561055 HOXA4Q00056 320 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms