RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 XRCC2O43543 280 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 PTP4A3O75365 173 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 IGHV1-8P0DP01 117 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 HOXB6P17509 224 aaKnown RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 CD24P25063 80 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 PIN1Q13526 163 aaPredicted RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 ZNF273Q14593 569 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 KIR2DS1Q14954 304 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 SNCBQ16143 134 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 SLC36A3Q495N2 470 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 IFI44LQ53G44 452 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 SLC18B1Q6NT16 456 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 C8orf82Q6P1X6 216 aaPredicted RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 CYP2R1Q6VVX0 501 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 THAP5Q7Z6K1 395 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 CALHM1Q8IU99 346 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 SGPP2Q8IWX5 399 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 OR13C2Q8NGS9 318 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 RPL3LQ92901 407 aaKnown RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 SLC7A6OSQ96CW6 309 aaPredicted RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 ASB9Q96DX5 294 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 PYURFQ96I23 114 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 CADM1Q9BY67 442 aaKnown RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 NUAK2Q9H093 628 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 TLNRD1Q9H1K6 362 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 DCLRE1BQ9H816 532 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 GORASP2Q9H8Y8 452 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 NMNAT1Q9HAN9 279 aaPredicted RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 ISYNA1Q9NPH2 558 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 PAPOLBQ9NRJ5 636 aaKnown RBP7.51□□□□□ -1.21
HERC1-210ENST00000560897 CD300AQ9UGN4 299 aa7.51□□□□□ -1.21
HERC1-210ENST00000560897 MUC4Q99102 2169 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 IGKV1D-17A0A075B6S4 117 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 TRIM64CA6NLI5 447 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 ARPC2O15144 300 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 TBX1O43435 398 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 HLA-DQA2P01906 255 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 PSG2P11465 335 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 PIPP12273 146 aaPredicted RBP7.5□□□□□ -1.21
HERC1-210ENST00000560897 SPNP16150 400 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 HTR1DP28221 377 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 GZMMP51124 257 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 SMIM11AP58511 58 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 TIGD6Q17RP2 521 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 CXorf66Q5JRM2 361 aaPredicted RBP7.5□□□□□ -1.21
HERC1-210ENST00000560897 LDLRAD2Q5SZI1 272 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 GPR139Q6DWJ6 353 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 LCN8Q6JVE9 175 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 TEX38Q6PEX7 206 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 DRAM2Q6UX65 266 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 ZBTB49Q6ZSB9 765 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 CBLL1Q75N03 491 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 ADCK1Q86TW2 530 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 FOXRED2Q8IWF2 684 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 OR6Q1Q8NGQ2 317 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 ST6GALNAC6Q969X2 333 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 SDSLQ96GA7 329 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 NOL4LQ96MY1 436 aaPredicted RBP7.5□□□□□ -1.21
HERC1-210ENST00000560897 FNDC11Q9BVV2 318 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 TBC1D23Q9NUY8 699 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 DCAF13Q9NV06 445 aaKnown RBP7.5□□□□□ -1.21
HERC1-210ENST00000560897 VSX1Q9NZR4 365 aaPredicted RBP7.5□□□□□ -1.21
HERC1-210ENST00000560897 MOB4Q9Y3A3 225 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 HSPE1-MOB4S4R3N1 261 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 V9GYQ6 96 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 KMT2AQ03164 3969 aa7.5□□□□□ -1.21
HERC1-210ENST00000560897 C17orf98A8MV24 154 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 SOCS2O14508 198 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 SAP30O75446 220 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 RBP4P02753 201 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 IGHV4-30-4P0DP06 118 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 ACTA2P62736 377 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 ACTG2P63267 376 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 ACTC1P68032 377 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 ACTA1P68133 377 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 ST3GAL3Q11203 375 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 TAF13Q15543 124 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 NRMQ8IXM6 262 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 ZNF561Q8N587 486 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 DRAM1Q8N682 238 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 EME1Q96AY2 570 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 TAMM41Q96BW9 452 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 HSH2DQ96JZ2 352 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 COPS4Q9BT78 406 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 ABCB9Q9NP78 766 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 KRCC1Q9NPI7 259 aaPredicted RBP7.49□□□□□ -1.21
HERC1-210ENST00000560897 POMPQ9Y244 141 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
HERC1-210ENST00000560897 AQP12BA6NM10 295 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 H3BSH0 61 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 AMY1AP04745 511 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 AMY2AP04746 511 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 RPLP1P05386 114 aaKnown RBP7.48□□□□□ -1.21
HERC1-210ENST00000560897 FABP3P05413 133 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 OR8U8P0C7N1 319 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 ZNF728P0DKX0 622 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 OR1E2P47887 323 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 MTNR1BP49286 362 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 SMIM21Q3B7S5 101 aa7.48□□□□□ -1.21
HERC1-210ENST00000560897 FAM122BQ7Z309 247 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms