RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 PAX6P26367 422 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 PRDX2P32119 198 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 HAAOP46952 286 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 UBE2E1P51965 193 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ACTR3P61158 418 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ODF4Q2M2E3 257 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 CLVS2Q5SYC1 327 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 BCL2L15Q5TBC7 163 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ZBTB37Q5TC79 503 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 NXNL2Q5VZ03 156 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 C12orf73Q69YU5 71 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 KDM4DQ6B0I6 523 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 GDPGP1Q6ZNW5 385 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 C1orf122Q6ZSJ8 110 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 Q6ZSV7 163 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 SSX6Q7RTT6 188 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ANGPTL5Q86XS5 388 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ZDHHC13Q8IUH4 622 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ELMOD2Q8IZ81 293 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ZSCAN4Q8NAM6 433 aaPredicted RBP8.36□□□□□ -1.07
LDLR-214ENST00000560628 POC1AQ8NBT0 407 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 OR4M1Q8NGD0 313 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 OR51G2Q8NGK0 314 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 OR14K1Q8NGZ2 314 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 LRTOMTQ8WZ04 291 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 SDSLQ96GA7 329 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 CITED1Q99966 193 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 PRRG3Q9BZD7 231 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 METTL8Q9H825 291 aaKnown RBP8.36□□□□□ -1.07
LDLR-214ENST00000560628 C19orf12Q9NSK7 152 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 RASL12Q9NYN1 266 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 AP4S1Q9Y587 144 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 R4GMQ9 66 aa8.36□□□□□ -1.07
LDLR-214ENST00000560628 PQLC2LA1A4F0 135 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 ANGPTL7O43827 346 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 INMTO95050 263 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 NXPH2O95156 264 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 PROK1P58294 105 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 ERVFRD-1P60508 538 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 RPL15P61313 204 aaKnown RBP8.35□□□□□ -1.07
LDLR-214ENST00000560628 DEFA6Q01524 100 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 C1orf146Q5VVC0 180 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 NCR3LG1Q68D85 454 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 TMEM200BQ69YZ2 307 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 DHRS7BQ6IAN0 325 aaPredicted RBP8.35□□□□□ -1.07
LDLR-214ENST00000560628 HCP5Q6MZN7 132 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 ZNF573Q86YE8 665 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 MKXQ8IYA7 352 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 YIPF7Q8N8F6 280 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 TRMT10AQ8TBZ6 339 aaKnown RBP8.35□□□□□ -1.07
LDLR-214ENST00000560628 RORBQ92753 470 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 ITFG2Q969R8 447 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 MNTQ99583 582 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 CIB1Q99828 191 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 PPA2Q9H2U2 334 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 CLN6Q9NWW5 311 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 OR14J1Q9UGF5 321 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 SF3B6Q9Y3B4 125 aaKnown RBP8.35□□□□□ -1.07
LDLR-214ENST00000560628 SNX5Q9Y5X3 404 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 V9GYS6 101 aa8.35□□□□□ -1.07
LDLR-214ENST00000560628 TRBV23-1A0A0A0MS06 115 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 FAM230AA0A1W2PPH8 454 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 A0A1W2PQL4 384 aaPredicted RBP8.34□□□□□ -1.07
LDLR-214ENST00000560628 ANKRD61A6NGH8 418 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 J3QT63 122 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 DLGAP1O14490 977 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 CLPXO76031 633 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 KRT8P05787 483 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 PGA5P0DJD9 388 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 RPL31P62899 125 aaKnown RBP8.34□□□□□ -1.07
LDLR-214ENST00000560628 EGR3Q06889 387 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 ACSM1Q08AH1 577 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 LY6EQ16553 131 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 SMIM21Q3B7S5 101 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 TMEM42Q69YG0 159 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 ASPHD2Q6ICH7 369 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 CALHM1Q8IU99 346 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 GID4Q8IVV7 300 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 OR10H4Q8NGA5 316 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 OR5D13Q8NGL4 314 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 OR2T27Q8NH04 317 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 NRIP2Q9BQI9 281 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 RIBC2Q9H4K1 309 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 MOB1AQ9H8S9 216 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 TCF7L1Q9HCS4 588 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 VPREB3Q9UKI3 123 aa8.34□□□□□ -1.07
LDLR-214ENST00000560628 TRRAPQ9Y4A5 3859 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 MEX3AA1L020 520 aaKnown RBP8.33□□□□□ -1.08
LDLR-214ENST00000560628 METTL15A6NJ78 407 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 SAC3D1A6NKF1 404 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 H3BUX3 64 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 M0QZ24 198 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 SLC1A7O00341 560 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 NOS1APO75052 506 aaPredicted RBP8.33□□□□□ -1.08
LDLR-214ENST00000560628 OR2T7P0C7T2 308 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 PIPP12273 146 aaPredicted RBP8.33□□□□□ -1.08
LDLR-214ENST00000560628 CCL3L1P16619 93 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 COX7A1P24310 79 aa8.33□□□□□ -1.08
LDLR-214ENST00000560628 HTR1FP30939 366 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms