RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 FKBP2P26885 142 aaKnown RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SNCAP37840 140 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 P2RY1P47900 373 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SLC26A5P58743 744 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 S100A10P60903 97 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SLC35A1P78382 337 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 ID2Q02363 134 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 PNRC1Q12796 327 aaPredicted RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 HNF4GQ14541 408 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 ELAVL1Q15717 326 aaKnown RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 MST1LQ2TV78 715 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 CHRFAM7AQ494W8 412 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 AWAT1Q58HT5 328 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 CT45A2Q5DJT8 189 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 KRBOX4Q5JUW0 171 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 TMEM268Q5VZI3 342 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 DHRS11Q6UWP2 260 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 GRINAQ7Z429 371 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF101Q8IZC7 436 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 PAQR4Q8N4S7 273 aaPredicted RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 IL22RA1Q8N6P7 574 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SUMF2Q8NBJ7 301 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 OR51A4Q8NGJ6 313 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 MARCH1Q8TCQ1 289 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SLC25A43Q8WUT9 341 aaPredicted RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 RNF133Q8WVZ7 376 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 ZNRF4Q8WWF5 429 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 NKD1Q969G9 470 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 RBMXL1Q96E39 390 aaKnown RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 BTF3L4Q96K17 158 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SPIN2AQ99865 258 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SPIN2BQ9BPZ2 258 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 PAPOLGQ9BWT3 736 aaKnown RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 SUCNR1Q9BXA5 334 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 TMEM59Q9BXS4 323 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 EIF5A2Q9GZV4 153 aaKnown RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 ARV1Q9H2C2 271 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 OR2S2Q9NQN1 319 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 NXT1Q9UKK6 140 aaKnown RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 NPIPA1Q9UND3 350 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 CLDN16Q9Y5I7 305 aa7.55□□□□□ -1.2
CCDC33-209ENST00000560565 MRPS18BQ9Y676 258 aaKnown RBP7.55□□□□□ -1.2
CCDC33-209ENST00000560565 EML6Q6ZMW3 1958 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 FAM230AA0A1W2PPH8 454 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ARGFXA6NJG6 315 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 K7ENP7 123 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 PPP1R2P9O14990 202 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 UTS2O95399 124 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 PRH1P02810 166 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 HOXB5P09067 269 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 HOXA5P20719 270 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ALDH3B1P43353 468 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 OR1D4P47884 311 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF84P51523 738 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 AKR1C2P52895 323 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 AKR1C1Q04828 323 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 SPOCK1Q08629 439 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ARFRP1Q13795 201 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 GNMTQ14749 295 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 OR7A5Q15622 319 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ACKR1Q16570 336 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 IAH1Q2TAA2 248 aaPredicted RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 NKAIN1Q4KMZ8 207 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 SOHLH1Q5JUK2 328 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 RPUSD3Q6P087 351 aaKnown RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF529Q6P280 563 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 INO80CQ6PI98 192 aaPredicted RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 NPSR1Q6W5P4 371 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 DOK3Q7L591 496 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ZAR1Q86SH2 424 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 VASH2Q86V25 355 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 LHFPL1Q86WI0 220 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 LYPD6Q86Y78 171 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 SULF2Q8IWU5 870 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 FAM185AQ8N0U4 392 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ZFP82Q8N141 532 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ZNF615Q8N8J6 731 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 CCDC71LQ8N9Z2 235 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 OR10AC1Q8NH08 325 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 C16orf52Q8NHV5 167 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ST8SIA1Q92185 356 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 DAZLQ92904 295 aaKnown RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 GNPNAT1Q96EK6 184 aaPredicted RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 AKR1E2Q96JD6 320 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 MOGAT1Q96PD6 335 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 CLCC1Q96S66 551 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 GINS3Q9BRX5 216 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 TBL1XR1Q9BZK7 514 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 ULBP3Q9BZM4 244 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 SPRY4Q9C004 299 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 OR11A1Q9GZK7 315 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 SLC25A31Q9H0C2 315 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 CNTD2Q9H8S5 307 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 WDR54Q9H977 334 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 DHCR7Q9UBM7 475 aaKnown RBP7.54□□□□□ -1.2
CCDC33-209ENST00000560565 SLC22A13Q9Y226 551 aa7.54□□□□□ -1.2
CCDC33-209ENST00000560565 EMC9Q9Y3B6 208 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms