RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 MTCP1P56278 107 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 P2RX3P56373 397 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 FAM3AP98173 230 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 SORDQ00796 357 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 RSU1Q15404 277 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 SNAI3Q3KNW1 292 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 OVCH2Q7RTZ1 564 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 ZNF546Q86UE3 836 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 MDS2Q8NDY4 140 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 CSNK2A3Q8NEV1 391 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 ZNF837Q96EG3 531 aaPredicted RBP8.44□□□□□ -1.06
RTF1-206ENST00000560447 ALKBH3Q96Q83 286 aaPredicted RBP8.44□□□□□ -1.06
RTF1-206ENST00000560447 VRK1Q99986 396 aaPredicted RBP8.44□□□□□ -1.06
RTF1-206ENST00000560447 PDCD10Q9BUL8 212 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 TTTY12Q9BZ98 90 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 SLC25A32Q9H2D1 315 aa8.44□□□□□ -1.06
RTF1-206ENST00000560447 A0A1W2PNU3 283 aaPredicted RBP8.43□□□□□ -1.06
RTF1-206ENST00000560447 KANTRA0A1W2PQU2 76 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 BCL2L11O43521 198 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 CSN2P05814 226 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 TMEM225BP0DP42 221 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 SERPINA2P20848 420 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 SDHBP21912 280 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 ACKR3P25106 362 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 NTF4P34130 210 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 PLGLB1Q02325 96 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 BAMBIQ13145 260 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 SRSF7Q16629 238 aaKnown RBP eCLIP8.43□□□□□ -1.06
RTF1-206ENST00000560447 CHRFAM7AQ494W8 412 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 HES3Q5TGS1 186 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 SPINK14Q6IE38 97 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 RNF144BQ7Z419 303 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 C1QL2Q7Z5L3 287 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 CCDC28AQ8IWP9 274 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 SKA3Q8IX90 412 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 TMEM251Q8N6I4 163 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 ZFP62Q8NB50 900 aaPredicted RBP8.43□□□□□ -1.06
RTF1-206ENST00000560447 TMEM178AQ8NBL3 297 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 OR5M9Q8NGP3 310 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 THAP6Q8TBB0 222 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 LRRC20Q8TCA0 184 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 MARCH1Q8TCQ1 289 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 WDR89Q96FK6 387 aaPredicted RBP8.43□□□□□ -1.06
RTF1-206ENST00000560447 SIGLEC12Q96PQ1 595 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 CITED4Q96RK1 184 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 DNTTIP1Q9H147 329 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 GPR173Q9NS66 373 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 PLEKHJ1Q9NW61 149 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 ZNF175Q9Y473 711 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 SESN1Q9Y6P5 492 aa8.43□□□□□ -1.06
RTF1-206ENST00000560447 A0A1W2PP11 408 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 hCG_1807616A0A1W2PRN6 198 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 C5orf63A6NC05 138 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 POM121CA8CG34 1229 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 MASP2O00187 686 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 LRP3O75074 770 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 SS18L1O75177 396 aaPredicted RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 TNFSF15O95150 251 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 CFDP00746 253 aaPredicted RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 CST4P01036 141 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 PDGFAP04085 211 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 CRHP06850 196 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 CTSDP07339 412 aaPredicted RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 PET100P0DJ07 73 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 LYL1P12980 280 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 M6PRP20645 277 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 ANOS1P23352 680 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 PSMB6P28072 239 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 CHATP28329 748 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 MEOX1P50221 254 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 ARF1P84077 181 aaKnown RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 HGFACQ04756 655 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 MALLQ13021 153 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 PABPC1L2AQ5JQF8 200 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 SFRP5Q5T4F7 317 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 TSPO2Q5TGU0 170 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 ELP2Q6IA86 826 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 Q6ZS49 121 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 LINC00596Q86U02 117 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 COMMD7Q86VX2 200 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 TMEM200AQ86VY9 491 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 OSR2Q8N2R0 312 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 EIF4E3Q8N5X7 224 aaKnown RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 OR13G1Q8NGZ3 307 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 AKR7LQ8NHP1 331 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 ABHD3Q8WU67 409 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 PPP1R1CQ8WVI7 109 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 APOBEC3DQ96AK3 386 aaPredicted RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 APH1AQ96BI3 265 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 ZNF845Q96IR2 970 aaPredicted RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 COL25A1Q9BXS0 654 aaPredicted RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 C5orf66Q9H5L9 145 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 RHOFQ9HBH0 211 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 EHFQ9NZC4 300 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 PFDN2Q9UHV9 154 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 C14orf166Q9Y224 244 aaKnown RBP8.42□□□□□ -1.06
RTF1-206ENST00000560447 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 MYO7BQ6PIF6 2116 aa8.42□□□□□ -1.06
RTF1-206ENST00000560447 MED12Q93074 2177 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms