RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ACTA1P68133 377 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 DGUOKQ16854 277 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 MIDNQ504T8 468 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 DHRS7BQ6IAN0 325 aaPredicted RBP11.58□□□□□ -0.56
TPM1-223ENST00000560445 PLEKHG7Q6ZR37 379 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 CCDC121Q6ZUS5 278 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 YIPF7Q8N8F6 280 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 OR51G2Q8NGK0 314 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 TRUB1Q8WWH5 349 aaKnown RBP11.58□□□□□ -0.56
TPM1-223ENST00000560445 RAB18Q9NP72 206 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 C1RLQ9NZP8 487 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 VPREB3Q9UKI3 123 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 COPS3Q9UNS2 423 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 V9GYS6 101 aa11.58□□□□□ -0.56
TPM1-223ENST00000560445 ANKRD61A6NGH8 418 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 SYT7O43581 403 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 MITFO75030 526 aaPredicted RBP11.57□□□□□ -0.56
TPM1-223ENST00000560445 CYB5AP00167 134 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 UBCP0CG48 685 aaKnown RBP11.57□□□□□ -0.56
TPM1-223ENST00000560445 PSG2P11465 335 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 TGFBR2P37173 567 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 MFGE8Q08431 387 aaPredicted RBP11.57□□□□□ -0.56
TPM1-223ENST00000560445 TMEM42Q69YG0 159 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 C11orf88Q6PI97 169 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 ACP7Q6ZNF0 438 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 FAM185AQ8N0U4 392 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 WFDC12Q8WWY7 111 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 CIB1Q99828 191 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 APOL4Q9BPW4 351 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 GABARAPL3Q9BY60 117 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 PKIBQ9C010 78 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 PPP1R3EQ9H7J1 279 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 HEXA-AS1Q9H8Q6 139 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 NEK6Q9HC98 313 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 ZNRD1Q9P1U0 126 aa11.57□□□□□ -0.56
TPM1-223ENST00000560445 IGKV1D-17A0A075B6S4 117 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 A0A1B0GW55 424 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 PQLC2LA1A4F0 135 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 MEIOCA2RUB1 952 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 METTL15A6NJ78 407 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 RHBDL1O75783 438 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 IGHV4-59P01825 116 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4L2P0CJ85 424 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4L3P0CJ86 424 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4L4P0CJ87 422 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4L5P0CJ88 424 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4L6P0CJ89 424 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4L7P0CJ90 424 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 PGA5P0DJD9 388 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 CCL1P22362 96 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 OMGP23515 440 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 SAA4P35542 130 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 RPL31P62899 125 aaKnown RBP11.56□□□□□ -0.56
TPM1-223ENST00000560445 EFNB1P98172 346 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 IL24Q13007 206 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 CNN3Q15417 329 aaKnown RBP11.56□□□□□ -0.56
TPM1-223ENST00000560445 AANATQ16613 207 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 OCLNQ16625 522 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 ZFP1Q6P2D0 407 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4L9Q6RFH8 374 aaPredicted RBP11.56□□□□□ -0.56
TPM1-223ENST00000560445 TREML4Q6UXN2 200 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 Q6ZSR3 168 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 KCTD20Q7Z5Y7 419 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 CALHM1Q8IU99 346 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 PDZD9Q8IXQ8 264 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 Q8IYB0 196 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 OR10H4Q8NGA5 316 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 PP6455Q8WZ26 134 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 SEH1LQ96EE3 360 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 NRIP2Q9BQI9 281 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 TTTY10Q9BZA0 68 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 SEMA6AQ9H2E6 1030 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 RIBC2Q9H4K1 309 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 USE1Q9NZ43 259 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 DUX4Q9UBX2 424 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 MRM2Q9UI43 246 aaKnown RBP11.56□□□□□ -0.56
TPM1-223ENST00000560445 ZNF222Q9UK12 451 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 OAZ3Q9UMX2 235 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 SLC22A13Q9Y226 551 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 RNF114Q9Y508 228 aa11.56□□□□□ -0.56
TPM1-223ENST00000560445 SOX21Q9Y651 276 aaPredicted RBP11.56□□□□□ -0.56
TPM1-223ENST00000560445 RFPL4AA6NLU0 287 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 RFPL4AL1F8VTS6 287 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 RNASEK-C17orf49H0YIS7 233 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 SRSF10O75494 262 aaKnown RBP11.55□□□□□ -0.56
TPM1-223ENST00000560445 FCN3O75636 299 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 AMY2BP19961 511 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 MPZP25189 248 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 PRDX2P32119 198 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 ERVFRD-1P60508 538 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 MEDAGQ5VYS4 303 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 LIAT1Q6ZQX7 453 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 ASRGL1Q7L266 308 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 ENTHD1Q8IYW4 607 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 Q8N7P7 452 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 ZNRF1Q8ND25 227 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 BEND2Q8NDZ0 799 aa11.55□□□□□ -0.56
TPM1-223ENST00000560445 FGF23Q9GZV9 251 aaPredicted RBP11.55□□□□□ -0.56
TPM1-223ENST00000560445 ANGPTL7O43827 346 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms