RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 CAPZA1P52907 286 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 ATP1B3P54709 279 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 RPS23P62266 143 aaKnown RBP9.6□□□□□ -0.87
USP3-218ENST00000560202 MSMPQ1L6U9 139 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 Q5BKY6 102 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 VHLLQ6RSH7 139 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 SLC22A25Q6T423 547 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 GLIPR1L1Q6UWM5 242 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 NUP37Q8NFH4 326 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 OR5A2Q8NGI9 324 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 OR5D18Q8NGL1 313 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 LHFPL5Q8TAF8 219 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 SYNPRQ8TBG9 265 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 LRRC20Q8TCA0 184 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 TMEM171Q8WVE6 324 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 HPSE2Q8WWQ2 592 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 OR5P3Q8WZ94 311 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 SLC25A38Q96DW6 304 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 NEDD4LQ96PU5 975 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 KCNK15Q9H427 330 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 ESRP2Q9H6T0 727 aaKnown RBP9.6□□□□□ -0.87
USP3-218ENST00000560202 EXTL2Q9UBQ6 330 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 PCNX1Q96RV3 2341 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 ESPL1Q14674 2120 aa9.6□□□□□ -0.87
USP3-218ENST00000560202 PQLC2LA1A4F0 135 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 LDLRAD4O15165 306 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 ORC5O43913 435 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 TIMM8AO60220 97 aaPredicted RBP9.59□□□□□ -0.87
USP3-218ENST00000560202 SSX4O60224 188 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 NAT2P11245 290 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 ZNF250P15622 560 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 ART1P52961 327 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 CTAG1AP78358 180 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 PLA2G7Q13093 441 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 NCMAPQ5T1S8 102 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 FAM131AQ6UXB0 335 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 CMTM4Q8IZR5 234 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 OR8G5Q8NG78 346 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 OR4M1Q8NGD0 313 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 TNFAIP8L1Q8WVP5 186 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 DVL3Q92997 716 aaPredicted RBP9.59□□□□□ -0.87
USP3-218ENST00000560202 SOSTQ9BQB4 213 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 FGF23Q9GZV9 251 aaPredicted RBP9.59□□□□□ -0.87
USP3-218ENST00000560202 ABCG5Q9H222 651 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 NPDC1Q9NQX5 325 aaPredicted RBP9.59□□□□□ -0.87
USP3-218ENST00000560202 MYEF2Q9P2K5 600 aaKnown RBP9.59□□□□□ -0.87
USP3-218ENST00000560202 DUSP13Q9UII6 198 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 BOLA1Q9Y3E2 137 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
USP3-218ENST00000560202 PRR14LQ5THK1 2151 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 A0A0X1KG70 313 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 IGHV3-13P01766 116 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 UBBP0CG47 229 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 VSIG8P0DPA2 414 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ALDH3B1P43353 468 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 GPM6AP51674 278 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 EFNB2P52799 333 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ZP1P60852 638 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 BTG1P62324 171 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 MADCAM1Q13477 382 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ZNF79Q15937 498 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 OR10K2Q6IF99 312 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 C1QL2Q7Z5L3 287 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 LRP11Q86VZ4 500 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 OR8S1Q8NH09 359 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 RAB40AQ8WXH6 277 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 S100A16Q96FQ6 103 aaKnown RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 PLPPR2Q96GM1 343 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 C1orf147Q96MC9 270 aaPredicted RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 FYTTD1Q96QD9 318 aaKnown RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 RANBP3Q9H6Z4 567 aaPredicted RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 CA10Q9NS85 328 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 TMEM100Q9NV29 134 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 RBFOX1Q9NWB1 397 aaKnown RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 GHRLQ9UBU3 117 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ING4Q9UNL4 249 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ATP23Q9Y6H3 246 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 OR5B21A6NL26 309 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 TMEM14DPA8MWL7 114 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ZNF732B4DXR9 585 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 TMEM225BP0DP42 221 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 KLF3P57682 345 aaPredicted RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 GNG3P63215 75 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 QRFPP83859 136 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 CD83Q01151 205 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 UNC119Q13432 240 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 IL18Q14116 193 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 BAK1Q16611 211 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 TOR2AQ5JU69 321 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ADAM5Q6NVV9 412 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 DTX3Q8N9I9 347 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 PTX4Q96A99 478 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 S100A13Q99584 98 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 MICU1Q9BPX6 476 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ADAT1Q9BUB4 502 aaKnown RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 C12orf4Q9NQ89 552 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 FBLN5Q9UBX5 448 aa9.58□□□□□ -0.88
USP3-218ENST00000560202 ELF5Q9UKW6 265 aaPredicted RBP9.58□□□□□ -0.88
USP3-218ENST00000560202 RAB22AQ9UL26 194 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms