RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RASSF6Q6ZTQ3 369 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 DCXRQ7Z4W1 244 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 OR10G2Q8NGC3 310 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 OR4X2Q8NGF9 303 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNRF4Q8WWF5 429 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 TFAP2CQ92754 450 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 FOXRED1Q96CU9 486 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 SDSLQ96GA7 329 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 REEP6Q96HR9 211 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 REEP1Q9H902 201 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 SP140LQ9H930 580 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ARMC1Q9NVT9 282 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 IL20Q9NYY1 176 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 USE1Q9NZ43 259 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 TBL2Q9Y4P3 447 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 LRP12Q9Y561 859 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ARRDC5A6NEK1 342 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 TMEM210A6NLX4 147 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 ARG1P05089 322 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 GLRA1P23415 457 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 SLC6A6P31641 620 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 DCTDP32321 178 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 PYCR1P32322 319 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 GSK3AP49840 483 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNF273Q14593 569 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 TIGD6Q17RP2 521 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 CD300LDQ6UXZ3 194 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 SLAMF6Q96DU3 332 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 FEVQ99581 238 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 MCRIP2Q9BUT9 160 aaKnown RBP10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 IFT27Q9BW83 186 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 RTL8AQ9BWD3 113 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 YY1AP1Q9H869 796 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 KRCC1Q9NPI7 259 aaPredicted RBP10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 CENPMQ9NSP4 180 aa10.22□□□□□ -0.77
RABGGTA-213ENST00000560127 hCG_1809904A0A1W2PP81 198 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 A0A1W2PPE2 198 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 A0A1W2PPH5 198 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 A0A1W2PR64 198 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 A0A1W2PRV1 198 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 ANXA2P2A6NMY6 339 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 FAM90A22PA8MWA6 464 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 PRKACGP22612 351 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 IFNGR2P38484 337 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 THBS3P49746 956 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 CAPZA1P52907 286 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 TAF13Q15543 124 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 SLC35F1Q5T1Q4 408 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 UNQ9370/PRO34162Q6UXP9 181 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 PRSS45Q7RTY3 260 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 LINC00471Q8N535 108 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 IQCF1Q8N6M8 205 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 CSNK2A3Q8NEV1 391 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 OR4M1Q8NGD0 313 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 GIPC3Q8TF64 312 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 HPSE2Q8WWQ2 592 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 OR5P3Q8WZ94 311 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 LYZL4Q96KX0 146 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNF649Q9BS31 505 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNF319Q9P2F9 582 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 DNAJB9Q9UBS3 223 aa10.21□□□□□ -0.77
RABGGTA-213ENST00000560127 FRAS1Q86XX4 4008 aa10.21□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF850A8MQ14 1090 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 C17orf98A8MV24 154 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 H3BNX3 289 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 ANXA2P07355 339 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 ACKR3P25106 362 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 AZGP1P25311 298 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 CX3CR1P49238 355 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 RASSF2P50749 326 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 DLX6P56179 175 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 PRDX4Q13162 271 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 GK3PQ14409 553 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 ATP6AP1Q15904 470 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 C1orf146Q5VVC0 180 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF626Q68DY1 528 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 FAHD1Q6P587 224 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 KCTD8Q6ZWB6 473 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 THAP5Q7Z6K1 395 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 CD177Q8N6Q3 437 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 OR52H1Q8NGJ2 320 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 RNF170Q96K19 258 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 PRR25Q96S07 402 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 NMNAT2Q9BZQ4 307 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 ZMAT5Q9UDW3 170 aaKnown RBP10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 MPC1Q9Y5U8 109 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 COMMD3-BMI1R4GMX3 469 aa10.2□□□□□ -0.78
RABGGTA-213ENST00000560127 ZNF878C9JN71 531 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 RAMP3O60896 148 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 MTRF1O75570 445 aaKnown RBP10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 LPLP06858 475 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 SPARCP09486 303 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 LYL1P12980 280 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 CEBPDP49716 269 aaPredicted RBP10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 ENTPD1P49961 510 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 SLC34A1Q06495 639 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 CRMP1Q14194 572 aa10.19□□□□□ -0.78
RABGGTA-213ENST00000560127 KPNB1Q14974 876 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms