RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 HAVCR1Q96D42 359 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 SEH1LQ96EE3 360 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 KCTD7Q96MP8 289 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 MYCBPQ99417 103 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 BCL2L14Q9BZR8 327 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 CHST5Q9GZS9 411 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 FAM192AQ9GZU8 254 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 PLK3Q9H4B4 646 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 RGCCQ9H4X1 137 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 METTL17Q9H7H0 456 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 SP140LQ9H930 580 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 TCF7L1Q9HCS4 588 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 CISD1Q9NZ45 108 aaKnown RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 IL36RNQ9UBH0 155 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 KCNN3Q9UGI6 736 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 DAPK2Q9UIK4 370 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 CMAHPQ9Y471 501 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 KLF2Q9Y5W3 355 aaPredicted RBP4.42□□□□□ -1.7
SPG11-220ENST00000559933 CACNG2Q9Y698 323 aa4.42□□□□□ -1.7
SPG11-220ENST00000559933 CSMD1Q96PZ7 3565 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 IGKV1-12A0A0C4DH73 117 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 PQLC2LA1A4F0 135 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ANXA2P2A6NMY6 339 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ANKRD30BLA7E2S9 258 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 F8VVB4 439 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 F8VWA3 439 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 LYNX1G3V0Z9 82 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 HS3ST1O14792 307 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 WNT9BO14905 357 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 SLC22A1O15245 554 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 SYNGR1O43759 233 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 NDUFS7O75251 213 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 MTRF1O75570 445 aaKnown RBP4.41□□□□□ -1.7
SPG11-220ENST00000559933 CST4P01036 141 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 IGKV1D-12P01611 117 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 CD8AP01732 235 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 CD2P06729 351 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 GRPP07492 148 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 LYNX1P0DP58 116 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 EGR1P18146 543 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 RAB3AP20336 220 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 RAB3BP20337 219 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 BDKRB2P30411 391 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 TTKP33981 857 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 SERPINF1P36955 418 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 CDKN1AP38936 164 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 MTNR1BP49286 362 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ZNF81P51508 661 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 EFNB2P52799 333 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ZP1P60852 638 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 RPS23P62266 143 aaKnown RBP4.41□□□□□ -1.7
SPG11-220ENST00000559933 PPP3R1P63098 170 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 CCL8P80075 99 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ZNF154Q13106 437 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 MAB21L1Q13394 359 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 PDCD1Q15116 288 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 TRAM1Q15629 374 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 MPPED2Q15777 294 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 CR1LQ2VPA4 569 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 TIMM50Q3ZCQ8 353 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 FAM201AQ5SY85 155 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 IDNKQ5T6J7 187 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 OR10K2Q6IF99 312 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 C11orf71Q6IPW1 123 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 SFXN4Q6P4A7 337 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 USP43Q70EL4 1123 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 LYPD6Q86Y78 171 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 CALHM1Q8IU99 346 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 EGFL6Q8IUX8 553 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 SERPINA12Q8IW75 414 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 MUC15Q8N387 334 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 OR5D14Q8NGL3 314 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 OR5H6Q8NGV6 325 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ZNF420Q8TAQ5 688 aaPredicted RBP4.41□□□□□ -1.7
SPG11-220ENST00000559933 LGALS14Q8TCE9 139 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ITLN1Q8WWA0 313 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 OR5P3Q8WZ94 311 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 FBXW5Q969U6 566 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 FAM46BQ96A09 425 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 SLC25A46Q96AG3 418 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 DGCR14Q96DF8 476 aaKnown RBP4.41□□□□□ -1.7
SPG11-220ENST00000559933 ELMOD3Q96FG2 381 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 RNF170Q96K19 258 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 DHRS9Q9BPW9 319 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 KRTAP4-11Q9BYQ6 195 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 KRTAP4-2Q9BYR5 136 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 BANF2Q9H503 90 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 OPA3Q9H6K4 179 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 ZNF442Q9H7R0 627 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 NEK6Q9HC98 313 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 MOV10Q9HCE1 1003 aaKnown RBP4.41□□□□□ -1.7
SPG11-220ENST00000559933 DYNLRB1Q9NP97 96 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 NGBQ9NPG2 151 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 UFSP2Q9NUQ7 469 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 MRPL15Q9P015 296 aaKnown RBP4.41□□□□□ -1.7
SPG11-220ENST00000559933 PLEKHB1Q9UF11 243 aaPredicted RBP4.41□□□□□ -1.7
SPG11-220ENST00000559933 LAMP3Q9UQV4 416 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 SPEF1Q9Y4P9 236 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 AKAP6Q13023 2319 aa4.41□□□□□ -1.7
SPG11-220ENST00000559933 CHD3Q12873 2000 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms