RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 BCAS4Q8TDM0 211 aa10.04□□□□□ -0.8
SPG11-219ENST00000559822 SEMA6AQ9H2E6 1030 aa10.04□□□□□ -0.8
SPG11-219ENST00000559822 MAB21L2Q9Y586 359 aa10.04□□□□□ -0.8
SPG11-219ENST00000559822 SNX5Q9Y5X3 404 aa10.04□□□□□ -0.8
SPG11-219ENST00000559822 R4GMQ9 66 aa10.04□□□□□ -0.8
SPG11-219ENST00000559822 TRRAPQ9Y4A5 3859 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 TSPAN9O75954 239 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 TTRP02766 147 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 HAAOP46952 286 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 DAPP51397 102 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 CXCR4P61073 352 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 PDLIM3Q53GG5 364 aaPredicted RBP10.03□□□□□ -0.8
SPG11-219ENST00000559822 ELMOD2Q8IZ81 293 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 TCEANCQ8N8B7 351 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 DTX3Q8N9I9 347 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 OR51G2Q8NGK0 314 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 TMEM163Q8TC26 289 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 UTP4Q969X6 686 aaKnown RBP10.03□□□□□ -0.8
SPG11-219ENST00000559822 SLC7A6OSQ96CW6 309 aaPredicted RBP10.03□□□□□ -0.8
SPG11-219ENST00000559822 TTTY10Q9BZA0 68 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 HEXA-AS1Q9H8Q6 139 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 PLEKHA1Q9HB21 404 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 RAB18Q9NP72 206 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 CLN6Q9NWW5 311 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 OR52A1Q9UKL2 312 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 COPS3Q9UNS2 423 aa10.03□□□□□ -0.8
SPG11-219ENST00000559822 RFPL4AA6NLU0 287 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 RFPL4AL1F8VTS6 287 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 G3V2T6 193 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 DYNC1I1O14576 645 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 ANGPTL7O43827 346 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 NOS1APO75052 506 aaPredicted RBP10.02□□□□□ -0.81
SPG11-219ENST00000559822 NXPH2O95156 264 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 TFF1P04155 84 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 PGA5P0DJD9 388 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 PRDX2P32119 198 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 RASSF2P50749 326 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 RPL31P62899 125 aaKnown RBP10.02□□□□□ -0.81
SPG11-219ENST00000559822 PRB3Q04118 309 aaPredicted RBP10.02□□□□□ -0.81
SPG11-219ENST00000559822 MFGE8Q08431 387 aaPredicted RBP10.02□□□□□ -0.81
SPG11-219ENST00000559822 AANATQ16613 207 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 C2orf68Q2NKX9 166 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 SLX4IPQ5VYV7 408 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 TMEM42Q69YG0 159 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 ASPHD2Q6ICH7 369 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 C11orf88Q6PI97 169 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 ZDHHC13Q8IUH4 622 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 CCDC54Q8NEL0 328 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 RBM4BQ9BQ04 359 aaKnown RBP10.02□□□□□ -0.81
SPG11-219ENST00000559822 ELL3Q9HB65 397 aaPredicted RBP10.02□□□□□ -0.81
SPG11-219ENST00000559822 ADGRL4Q9HBW9 690 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 USE1Q9NZ43 259 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 V9GYS6 101 aa10.02□□□□□ -0.81
SPG11-219ENST00000559822 PQLC2LA1A4F0 135 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 ZAR1LA6NP61 321 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 PRR32B1ATL7 298 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 SRSF10O75494 262 aaKnown RBP10.01□□□□□ -0.81
SPG11-219ENST00000559822 KRT8P05787 483 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 FCGR1AP12314 374 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 FASP25445 335 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 GABRA5P31644 462 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 DLX1P56177 255 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 LGALS4P56470 323 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 KRTAP10-3P60369 221 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 ERVFRD-1P60508 538 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 ATP6AP1Q15904 470 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 LRRC75BQ2VPJ9 315 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 DMRTC1Q5HYR2 192 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 AADACL4Q5VUY2 407 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 C12orf73Q69YU5 71 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 LIAT1Q6ZQX7 453 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 CALHM1Q8IU99 346 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 PNKDQ8N490 385 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 OR4C13Q8NGP0 309 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 OR2T27Q8NH04 317 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 SSX3Q99909 188 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 APOL4Q9BPW4 351 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 NRIP2Q9BQI9 281 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 PKIBQ9C010 78 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 GABARAPL1Q9H0R8 117 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 PPA2Q9H2U2 334 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 GPR173Q9NS66 373 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 C19orf12Q9NSK7 152 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 FBLN5Q9UBX5 448 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 WARS2Q9UGM6 360 aaKnown RBP10.01□□□□□ -0.81
SPG11-219ENST00000559822 SLC7A11Q9UPY5 501 aa10.01□□□□□ -0.81
SPG11-219ENST00000559822 H3BUX3 64 aa10□□□□□ -0.81
SPG11-219ENST00000559822 SYNGR1O43759 233 aa10□□□□□ -0.81
SPG11-219ENST00000559822 GATBO75879 557 aaKnown RBP10□□□□□ -0.81
SPG11-219ENST00000559822 MPZP25189 248 aa10□□□□□ -0.81
SPG11-219ENST00000559822 EFNB1P98172 346 aa10□□□□□ -0.81
SPG11-219ENST00000559822 KDM4DQ6B0I6 523 aa10□□□□□ -0.81
SPG11-219ENST00000559822 Q6ZSR3 168 aa10□□□□□ -0.81
SPG11-219ENST00000559822 BCDIN3DQ7Z5W3 292 aaKnown RBP10□□□□□ -0.81
SPG11-219ENST00000559822 CD177Q8N6Q3 437 aa10□□□□□ -0.81
SPG11-219ENST00000559822 YIPF7Q8N8F6 280 aa10□□□□□ -0.81
SPG11-219ENST00000559822 OR14K1Q8NGZ2 314 aa10□□□□□ -0.81
SPG11-219ENST00000559822 PPP1R14AQ96A00 147 aa10□□□□□ -0.81
SPG11-219ENST00000559822 ZNF488Q96MN9 340 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms