RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FGF23Q9GZV9 251 aaPredicted RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 MMP27Q9H306 513 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ACOXLQ9NUZ1 547 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 PAK1IP1Q9NWT1 392 aaPredicted RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 C1orf123Q9NWV4 160 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 CLN6Q9NWW5 311 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 IMPAD1Q9NX62 359 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ZNF319Q9P2F9 582 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 KAAG1Q9UBP8 84 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 POLR1DQ9Y2S0 133 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 TNFRSF18Q9Y5U5 241 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 TVP23AA6NH52 213 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 ZAR1LA6NP61 321 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 RNASEK-C17orf49H0YIS7 233 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 BHLHE40O14503 412 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 MITFO75030 526 aaPredicted RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 INMTO95050 263 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 HTR3BO95264 441 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 TFF1P04155 84 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 LIPFP07098 398 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 SLC2A1P11166 492 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 OSMP13725 252 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 SELLP14151 372 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 IRF2P14316 349 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 ZNF182P17025 639 aaPredicted RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 GABRB1P18505 474 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 SLC6A6P31641 620 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 BMXP51813 675 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 CRISP1P54107 249 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 TPTEP56180 551 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 RPL15P61313 204 aaKnown RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 PDCD1Q15116 288 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 OR8B8Q15620 311 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 SLC35F1Q5T1Q4 408 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 CD276Q5ZPR3 534 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 HIST2H2BDQ6DRA6 164 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 ZNF770Q6IQ21 691 aaPredicted RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 KRTAP5-11Q6L8G4 156 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 PGBD2Q6P3X8 592 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 DNM1P34Q6PK57 102 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 Q6ZNX1 250 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 C17orf107Q6ZR85 190 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 SLC16A12Q6ZSM3 486 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 ZNF367Q7RTV3 350 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 MRPL21Q7Z2W9 205 aaKnown RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 VMO1Q7Z5L0 202 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 PNKDQ8N490 385 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 FAM216BQ8N7L0 139 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 BOLLQ8N9W6 283 aaKnown RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 CYB561A3Q8NBI2 242 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 DRAXINQ8NBI3 349 aaPredicted RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 OR56B2PQ8NGI1 322 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 OR51L1Q8NGJ5 315 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 OR8J1Q8NGP2 316 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 OR11L1Q8NGX0 322 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 CNIH3Q8TBE1 160 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 CHPT1Q8WUD6 406 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 APH1BQ8WW43 257 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 SPRYD4Q8WW59 207 aaPredicted RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 SSMEM1Q8WWF3 244 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 TNFRSF14Q92956 283 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 AJUBAQ96IF1 538 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 DCUN1D5Q9BTE7 237 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 IFT27Q9BW83 186 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 TEX12Q9BXU0 123 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 PRRG3Q9BZD7 231 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 NMNAT2Q9BZQ4 307 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 NDEL1Q9GZM8 345 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 C16orf95Q9H693 158 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 EGLN3Q9H6Z9 239 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 FN3KRPQ9HA64 309 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 MRPL15Q9P015 296 aaKnown RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 ERVK-18Q9QC07 812 aa4.75□□□□□ -1.65
USP3-215ENST00000559771 RPUSD1Q9UJJ7 312 aaKnown RBP4.75□□□□□ -1.65
USP3-215ENST00000559771 TRAV38-1A0A0B4J264 116 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 PNMA8CA0A1B0GUJ8 204 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 M0QZ24 198 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 NDUFA2O43678 99 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 IDH3BO43837 385 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 XPNPEP2O43895 674 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 PFDN1O60925 122 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 TSPAN9O75954 239 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 RENP00797 406 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CRYBA1P05813 215 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 GRPP07492 148 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CLUP10909 449 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CD36P16671 472 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 PSMB9P28065 219 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 CD40LGP29965 261 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 FMO3P31513 532 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 SLC15A1P46059 708 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 TGM4P49221 684 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 ENTPD1P49961 510 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 PRKXP51817 358 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 FAM3AP98173 230 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 TSPAN31Q12999 210 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 MALLQ13021 153 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 KLRD1Q13241 179 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 IRF3Q14653 427 aa4.74□□□□□ -1.65
USP3-215ENST00000559771 PTGES3Q15185 160 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms