RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SIGLEC5O15389 551 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 FCN3O75636 299 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 FADS2O95864 444 aaKnown RBP6.77□□□□□ -1.33
SNX1-207ENST00000559401 PSG2P11465 335 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 AMY2BP19961 511 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 CCL1P22362 96 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 KIR3DL2P43630 455 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 CEBPDP49716 269 aaPredicted RBP6.77□□□□□ -1.33
SNX1-207ENST00000559401 OR12D2P58182 307 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 PDCD1Q15116 288 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 RCN1Q15293 331 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 CNN3Q15417 329 aaKnown RBP6.77□□□□□ -1.33
SNX1-207ENST00000559401 DGUOKQ16854 277 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 CDONQ4KMG0 1287 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 SLC25A30Q5SVS4 291 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 TMEM244Q5VVB8 128 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 TMEM42Q69YG0 159 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ACP7Q6ZNF0 438 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 KCTD20Q7Z5Y7 419 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 LHFPL3Q86UP9 236 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ANGPTL5Q86XS5 388 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 RDH10Q8IZV5 341 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 FAM185AQ8N0U4 392 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ZNF676Q8N7Q3 588 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 POC1AQ8NBT0 407 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ZNRF1Q8ND25 227 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 CCDC54Q8NEL0 328 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 OR2G2Q8NGZ5 317 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ANGPTL6Q8NI99 470 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 CYGBQ8WWM9 190 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 SLC25A28Q96A46 364 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 LGALS12Q96DT0 336 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 BORCS8Q96FH0 119 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 C4orf36Q96KX1 117 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ZNF48Q96MX3 618 aaPredicted RBP6.77□□□□□ -1.33
SNX1-207ENST00000559401 TBX15Q96SF7 602 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 MYCBPQ99417 103 aaPredicted RBP6.77□□□□□ -1.33
SNX1-207ENST00000559401 DCTN5Q9BTE1 182 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ALG8Q9BVK2 526 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 CNTD2Q9H8S5 307 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 ELL3Q9HB65 397 aaPredicted RBP6.77□□□□□ -1.33
SNX1-207ENST00000559401 SIRT7Q9NRC8 400 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 RASL12Q9NYN1 266 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 SVEP1Q4LDE5 3571 aa6.77□□□□□ -1.33
SNX1-207ENST00000559401 IGKV1D-17A0A075B6S4 117 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 CENPVL3A0A0U1RRI6 287 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 A0A1W2PRD5 423 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 A0A1W2PRF3 423 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 A0A1W2PRM7 423 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 RFPL4AA6NLU0 287 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 RFPL4AL1F8VTS6 287 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 ACAA1P09110 424 aaPredicted RBP6.76□□□□□ -1.33
SNX1-207ENST00000559401 PGA5P0DJD9 388 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 MMP9P14780 707 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 GABRB1P18505 474 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 PRTN3P24158 256 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 TGM4P49221 684 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 POU3F4P49335 361 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 FUT6P51993 359 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 ISL1P61371 349 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 PRB3Q04118 309 aaPredicted RBP6.76□□□□□ -1.33
SNX1-207ENST00000559401 DEFB112Q30KQ8 113 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 C11orf91Q3C1V1 193 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 ATPAF1Q5TC12 328 aaPredicted RBP6.76□□□□□ -1.33
SNX1-207ENST00000559401 LPCAT4Q643R3 524 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 C9orf139Q6ZV77 190 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 KRT74Q7RTS7 529 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 CALHM1Q8IU99 346 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 C3orf56Q8N813 242 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 OR13C3Q8NGS6 347 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 RHOXF1Q8NHV9 184 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 PP6455Q8WZ26 134 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 SLAMF9Q96A28 289 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 FGGYQ96C11 551 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 CHST5Q9GZS9 411 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 SIRPDQ9H106 197 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 ZMAT3Q9HA38 289 aaKnown RBP6.76□□□□□ -1.33
SNX1-207ENST00000559401 FRRS1LQ9P0K9 344 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 HHLA2Q9UM44 414 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 EXOGQ9Y2C4 368 aaKnown RBP6.76□□□□□ -1.33
SNX1-207ENST00000559401 MYRFQ9Y2G1 1151 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 RPL36Q9Y3U8 105 aaKnown RBP6.76□□□□□ -1.33
SNX1-207ENST00000559401 KPTNQ9Y664 436 aa6.76□□□□□ -1.33
SNX1-207ENST00000559401 IGHV1-69DA0A0B4J2H0 117 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 ANKRD65E5RJM6 399 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 E9PQ18 207 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 H0YAE9 185 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 J3QRE1 110 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 HOXA3O43365 443 aaPredicted RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 CLIC3O95833 236 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 CYB5AP00167 134 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 IGHV1-69P01742 117 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 PIPP12273 146 aaPredicted RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 EEF1B2P24534 225 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 AZGP1P25311 298 aaKnown RBP6.75□□□□□ -1.33
SNX1-207ENST00000559401 PEX2P28328 305 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 PRDX2P32119 198 aa6.75□□□□□ -1.33
SNX1-207ENST00000559401 RBP2P50120 134 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms