RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZNF718Q3SXZ3 478 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 MBNL2Q5VZF2 373 aaKnown RBP14.12□□□□□ -0.15
TPM1-219ENST00000559397 MRPL21Q7Z2W9 205 aaKnown RBP14.12□□□□□ -0.15
TPM1-219ENST00000559397 PNLDC1Q8NA58 520 aaKnown RBP14.12□□□□□ -0.15
TPM1-219ENST00000559397 OR52I2Q8NH67 350 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 NPRL2Q8WTW4 380 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 C14orf79Q96F83 325 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 GPER1Q99527 375 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 AUNIPQ9H7T9 357 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 FZR1Q9UM11 496 aa14.12□□□□□ -0.15
TPM1-219ENST00000559397 RAI1Q7Z5J4 1906 aaPredicted RBP14.12□□□□□ -0.15
TPM1-219ENST00000559397 TRAV18A0A075B6X5 111 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 LYRM1O43325 122 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 CST4P01036 141 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 ZP1P60852 638 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 TLE4Q04727 773 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 ADIPOQQ15848 244 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 DMRTC1Q5HYR2 192 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 ZNF57Q68EA5 555 aaPredicted RBP14.11□□□□□ -0.15
TPM1-219ENST00000559397 HIST2H2BCQ6DN03 193 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 RAB12Q6IQ22 244 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 MZT2BQ6NZ67 158 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 LRP11Q86VZ4 500 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 CSNK2A3Q8NEV1 391 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 OR56B2PQ8NGI1 322 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 FCAMRQ8WWV6 532 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 MRPL24Q96A35 216 aaKnown RBP14.11□□□□□ -0.15
TPM1-219ENST00000559397 PHF21AQ96BD5 680 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 CMBLQ96DG6 245 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 NEDD4LQ96PU5 975 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 DHRS9Q9BPW9 319 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 RBFOX1Q9NWB1 397 aaKnown RBP14.11□□□□□ -0.15
TPM1-219ENST00000559397 MYEF2Q9P2K5 600 aaKnown RBP14.11□□□□□ -0.15
TPM1-219ENST00000559397 LRBAP50851 2863 aa14.11□□□□□ -0.15
TPM1-219ENST00000559397 METTL21EPA6NDL7 271 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 RAB27BO00194 218 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 ORC5O43913 435 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 RAC2P15153 192 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 FABP6P51161 128 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 MTCP1P56278 107 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 PSG7Q13046 419 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 KLF9Q13886 244 aaPredicted RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 LHFPL2Q6ZUX7 228 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 KCNG3Q8TAE7 436 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 GCDHQ92947 438 aaPredicted RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 CPNE2Q96FN4 548 aaPredicted RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 NUDT16L1Q9BRJ7 211 aaKnown RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 MRPL37Q9BZE1 423 aaKnown RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 CELSR2Q9HCU4 2923 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 PTPN13Q12923 2485 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 IGLV3-9A0A075B6K5 115 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 IGKV1-27A0A075B6S5 117 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 HS3ST1O14792 307 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 SCGNO76038 276 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 OR4A8P0C604 315 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 PTHLHP12272 177 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 APOBEC3AP31941 199 aaPredicted RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 GDNFP39905 211 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 RBP2P50120 134 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 FUT6P51993 359 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 DYRK1AQ13627 763 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 GPR176Q14439 515 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 RNASE12Q5GAN4 147 aaKnown RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 ASCL4Q6XD76 172 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 C1QL2Q7Z5L3 287 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 CDH24Q86UP0 819 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 DUSP18Q8NEJ0 188 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 TNFAIP8L1Q8WVP5 186 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 PIGCQ92535 297 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 FAM46BQ96A09 425 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 LPAR5Q9H1C0 372 aa14.1□□□□□ -0.15
TPM1-219ENST00000559397 CLEC4MQ9H2X3 399 aaPredicted RBP14.1□□□□□ -0.15
TPM1-219ENST00000559397 FUOMA2VDF0 154 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 CD300LBA8K4G0 201 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 CDC14BO60729 498 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 IGHV3-13P01766 116 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 KITLGP21583 273 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 GCH1P30793 250 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 SRP9P49458 86 aaKnown RBP14.09□□□□□ -0.15
TPM1-219ENST00000559397 BCAP31P51572 246 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 MOGAT2Q3SYC2 334 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 MOB3CQ70IA8 216 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 TOMM5Q8N4H5 51 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 TMEM104Q8NE00 496 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 FBXW5Q969U6 566 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 MARVELD3Q96A59 401 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 SYT3Q9BQG1 590 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 C7orf50Q9BRJ6 194 aaKnown RBP14.09□□□□□ -0.15
TPM1-219ENST00000559397 PLEKHF2Q9H8W4 249 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 DUSP13Q9UII6 198 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 SLC7A11Q9UPY5 501 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 CACNG2Q9Y698 323 aa14.09□□□□□ -0.15
TPM1-219ENST00000559397 MEIOCA2RUB1 952 aa14.08□□□□□ -0.16
TPM1-219ENST00000559397 VSTM5A8MXK1 200 aa14.08□□□□□ -0.16
TPM1-219ENST00000559397 H7C417 338 aa14.08□□□□□ -0.16
TPM1-219ENST00000559397 SULT1C2O00338 296 aa14.08□□□□□ -0.16
TPM1-219ENST00000559397 CHRM2P08172 466 aa14.08□□□□□ -0.16
TPM1-219ENST00000559397 SERPINF1P36955 418 aa14.08□□□□□ -0.16
TPM1-219ENST00000559397 EFNB3Q15768 340 aa14.08□□□□□ -0.16
TPM1-219ENST00000559397 FAM189A2Q15884 450 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms