RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 AMBNQ9NP70 447 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 GPR173Q9NS66 373 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 ACOXLQ9NUZ1 547 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 SLC25A10Q9UBX3 287 aaPredicted RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 HHLA2Q9UM44 414 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 EXOGQ9Y2C4 368 aaKnown RBP3.64□□□□□ -1.83
SNX1-205ENST00000559339 HSPE1-MOB4S4R3N1 261 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 V9GYS6 101 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 DYSFO75923 2080 aa3.64□□□□□ -1.83
SNX1-205ENST00000559339 COL6A5A8TX70 2615 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 WNK2Q9Y3S1 2297 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 TRAV40A0A0B4J280 105 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 TRBV2A0A0J9YWF9 115 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 A0A1B0GTI1 187 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 LOC107986453A0A1B0GWG9 222 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 A0A1W2PQ09 198 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 PQLC2LA1A4F0 135 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 A6NIN4 97 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 RFPL4AA6NLU0 287 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 E9PQ18 207 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 RFPL4AL1F8VTS6 287 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 H0YAE9 185 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 H0YHG0 523 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 H3BSH0 61 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 J3QRE1 110 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 J3QT63 122 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 TNFRSF13BO14836 293 aaPredicted RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 SIGLEC5O15389 551 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 NOS1APO75052 506 aaPredicted RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 RGS9O75916 674 aaPredicted RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 IGHA1P01876 353 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 CD2P06729 351 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ACAA1P09110 424 aaPredicted RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 NDUFB7P17568 137 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 EGR1P18146 543 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 GABRB1P18505 474 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 EEF1B2P24534 225 aaKnown RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 PEX2P28328 305 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 RBP2P50120 134 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 CAPZA1P52907 286 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ATP1B3P54709 279 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 CAV3P56539 151 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 FGF12P61328 243 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ISL1P61371 349 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ARF6P62330 175 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ACTG1P63261 375 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 HOXA4Q00056 320 aaPredicted RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 PAX2Q02962 417 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 IL24Q13007 206 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ALKBH1Q13686 389 aaKnown RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 PDCD1Q15116 288 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 UBE2V2Q15819 145 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 CCDC58Q4VC31 144 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 DMRTC1Q5HYR2 192 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ZNF691Q5VV52 312 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 STUMQ69YW2 141 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 FDX2Q6P4F2 183 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 Q6ZSR3 168 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 LHFPL2Q6ZUX7 228 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 UTS2BQ765I0 119 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 MKXQ8IYA7 352 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 Q8IYB0 196 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 RDH10Q8IZV5 341 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 PRSS35Q8N3Z0 413 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ZNF561Q8N587 486 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 FAM216BQ8N7L0 139 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 POC1AQ8NBT0 407 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 DNAAF1Q8NEP3 725 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 TMEM185AQ8NFB2 350 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 OR13C3Q8NGS6 347 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ANGPTL6Q8NI99 470 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 TRMT10AQ8TBZ6 339 aaKnown RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 GATAD2BQ8WXI9 593 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 H1FXQ92522 213 aaKnown RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 GCDHQ92947 438 aaPredicted RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 SLC25A28Q96A46 364 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 UPRTQ96BW1 309 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 PELI1Q96FA3 418 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 CEP19Q96LK0 163 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 WDFY2Q96P53 400 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 SLC6A7Q99884 636 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 C19orf24Q9BVV8 132 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 PKIBQ9C010 78 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 WDR13Q9H1Z4 485 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 RASSF4Q9H2L5 321 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 METTL8Q9H825 291 aaKnown RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 SMURF1Q9HCE7 757 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 SNTG1Q9NSN8 517 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 MRPS18AQ9NVS2 196 aaKnown RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 ERVK13-1Q9NX77 482 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 FRRS1LQ9P0K9 344 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 ONECUT1Q9UBC0 465 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 CTSZQ9UBR2 303 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 AASSQ9UDR5 926 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 OPN4Q9UHM6 478 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 GLS2Q9UI32 602 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 RPUSD1Q9UJJ7 312 aaKnown RBP3.63□□□□□ -1.83
SNX1-205ENST00000559339 DHDHQ9UQ10 334 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 MYRFQ9Y2G1 1151 aa3.63□□□□□ -1.83
SNX1-205ENST00000559339 CAB39Q9Y376 341 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms