RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SYNGR1O43759 233 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 AIREO43918 545 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 RHBDL1O75783 438 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 IGKV1D-12P01611 117 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 PGA5P0DJD9 388 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 LYNX1P0DP58 116 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 HAAOP46952 286 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 ATP5J2P56134 94 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 MTCP1P56278 107 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 TMEM33P57088 247 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 PPP3R1P63098 170 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 HNRNPA0Q13151 305 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 DDI2Q5TDH0 399 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 TEX36Q5VZQ5 186 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF826PQ6ZT77 177 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 SATL1Q86VE3 508 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 TPRA1Q86W33 373 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 POC1AQ8NBT0 407 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 PXT1Q8NFP0 134 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF420Q8TAQ5 688 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 TRMT10AQ8TBZ6 339 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 NPRL2Q8WTW4 380 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 KCTD7Q96MP8 289 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 NRIP2Q9BQI9 281 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 UQCC2Q9BRT2 126 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 CHODLQ9H9P2 273 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 FN3KRPQ9HA64 309 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 RHOFQ9HBH0 211 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 NEK6Q9HC98 313 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 TCF7L1Q9HCS4 588 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 MTCH1Q9NZJ7 389 aa12.45□□□□□ -0.42
SNRPA1-207ENST00000559309 FAM230AA0A1W2PPH8 454 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 NDUFS8O00217 210 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 SLC22A1O15245 554 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 KDM4BO94953 1096 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 MAS1P04201 325 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 GRPP07492 148 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF93P35789 620 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 RBMXP38159 391 aaKnown RBP12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 TMBIM6P55061 237 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 KRTAP21-3Q3LHN1 58 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 ELP2Q6IA86 826 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 HAGHLQ6PII5 290 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 C1QL2Q7Z5L3 287 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 ANGPTL5Q86XS5 388 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF525Q8N782 197 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 C10orf105Q8TEF2 133 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 FOXRED1Q96CU9 486 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 PERPQ96FX8 193 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 SPACA5Q96QH8 159 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 SEBOXQ9HB31 216 aaPredicted RBP12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 C1orf123Q9NWV4 160 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 RNF7Q9UBF6 113 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 GSTK1Q9Y2Q3 226 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 CEPT1Q9Y6K0 416 aa12.44□□□□□ -0.42
SNRPA1-207ENST00000559309 IGHV3-64DA0A0J9YX35 117 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 F8VVB4 439 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 F8VWA3 439 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 IGHV2-70P01814 119 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 CSF3P09919 207 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 EGR1P18146 543 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 TGFBR1P36897 503 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 PTGFRP43088 359 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 DSCR9P59020 149 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 HFEQ30201 348 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 GPR107Q5VW38 600 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 OR4D6Q8NGJ1 314 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 HPS1Q92902 700 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 CPNE2Q96FN4 548 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 CNTD2Q9H8S5 307 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 UFSP2Q9NUQ7 469 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 POLDIP2Q9Y2S7 368 aa12.43□□□□□ -0.42
SNRPA1-207ENST00000559309 LOC100506127A0A0U1RQW1 187 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 SLC17A2O00624 439 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 SSX4O60224 188 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 CDC14BO60729 498 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 CYB5R3P00387 301 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 HCKP08631 526 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 SDC2P34741 201 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 PSMD7P51665 324 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 NCS1P62166 190 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 QRFPP83859 136 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 HOXA4Q00056 320 aaPredicted RBP12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 SLC25A26Q70HW3 274 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 FAM90A1Q86YD7 464 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 RAB2BQ8WUD1 216 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 CCL17Q92583 94 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 SLITRK2Q9H156 845 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 EXOSC4Q9NPD3 245 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 RASL12Q9NYN1 266 aa12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 AK6Q9Y3D8 172 aaKnown RBP12.42□□□□□ -0.42
SNRPA1-207ENST00000559309 NIPBLQ6KC79 2804 aaeCLIP12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 LRRC30A6NM36 301 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 ZNF701M0R085 212 aaPredicted RBP12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 PDCD5O14737 125 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 LDLRAD4O15165 306 aa12.41□□□□□ -0.42
SNRPA1-207ENST00000559309 MAGEB3O15480 346 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms