RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 DDOSTP39656 456 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 OPRL1P41146 370 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 GABRA2P47869 451 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 IL5RAQ01344 420 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 KLRD1Q13241 179 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 APOFQ13790 326 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 FLOT2Q14254 428 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 CEP78Q5JTW2 689 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 TEX30Q5JUR7 227 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 WDR82Q6UXN9 313 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 C9orf139Q6ZV77 190 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 SLC36A1Q7Z2H8 476 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 KRT77Q7Z794 578 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 C11orf53Q8IXP5 236 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 BATF2Q8N1L9 274 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 ARHGAP24Q8N264 748 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 PNKDQ8N490 385 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 FTMTQ8N4E7 242 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 CSNK2A3Q8NEV1 391 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 OR4F5Q8NH21 305 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 CANT1Q8WVQ1 401 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 RNF133Q8WVZ7 376 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 SPSB4Q96A44 273 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 RNF170Q96K19 258 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 FAM71F1Q96KD3 344 aaPredicted RBP6.03□□□□□ -1.44
SPG11-213ENST00000558988 HIST1H2AAQ96QV6 131 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 PKP2Q99959 881 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 RTL8AQ9BWD3 113 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 SIRPDQ9H106 197 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 WDR13Q9H1Z4 485 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 SP140LQ9H930 580 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 ELL3Q9HB65 397 aaPredicted RBP6.03□□□□□ -1.44
SPG11-213ENST00000558988 ACOXLQ9NUZ1 547 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 TVP23BQ9NYZ1 205 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 RPUSD1Q9UJJ7 312 aaKnown RBP6.03□□□□□ -1.44
SPG11-213ENST00000558988 ZNF391Q9UJN7 358 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 LAMP5Q9UJQ1 280 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 IKZF2Q9UKS7 526 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 LRP12Q9Y561 859 aa6.03□□□□□ -1.44
SPG11-213ENST00000558988 BTBD17A6NE02 478 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 M0R129 80 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 GYG2O15488 501 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 GPR137BO60478 399 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 TIPRLO75663 272 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 FSTL3O95633 263 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 PTBP3O95758 552 aaKnown RBP6.02□□□□□ -1.45
SPG11-213ENST00000558988 LIPFP07098 398 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 T-ENOLP0DO92 83 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 OSMP13725 252 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 MMP9P14780 707 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 MUC1P15941 1255 aaPredicted RBP6.02□□□□□ -1.45
SPG11-213ENST00000558988 ACKR3P25106 362 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 GPM6AP51674 278 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 CAPZA1P52907 286 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 ESRRGP62508 458 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 CBX1P83916 185 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 PDCD1Q15116 288 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 SNAPC1Q16533 368 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 KLHL22Q53GT1 634 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 LRRC10Q5BKY1 277 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 TEX36Q5VZQ5 186 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 MOB3CQ70IA8 216 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 PRSS45Q7RTY3 260 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 ZDHHC23Q8IYP9 409 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 CMTM4Q8IZR5 234 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 TMEM185AQ8NFB2 350 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 OR8B12Q8NGG6 310 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 OTOSQ8NHW6 89 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 TBC1D15Q8TC07 691 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 SSMEM1Q8WWF3 244 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 FOXRED1Q96CU9 486 aaPredicted RBP6.02□□□□□ -1.45
SPG11-213ENST00000558988 LYZL4Q96KX0 146 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 TEX12Q9BXU0 123 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 RNPEPL1Q9HAU8 725 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 BEX1Q9HBH7 125 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 NOX4Q9NPH5 578 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 HAO2Q9NYQ3 351 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 C1RLQ9NZP8 487 aa6.02□□□□□ -1.45
SPG11-213ENST00000558988 H2AFY2Q9P0M6 372 aaPredicted RBP6.02□□□□□ -1.45
SPG11-213ENST00000558988 A0A1B0GVI7 797 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 TMEM269A0A1B0GVZ9 245 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 ZNF732B4DXR9 585 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 H3BSH0 61 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.01□□□□□ -1.45
SPG11-213ENST00000558988 TNFRSF13BO14836 293 aaPredicted RBP6.01□□□□□ -1.45
SPG11-213ENST00000558988 MAGEB4O15481 346 aaPredicted RBP6.01□□□□□ -1.45
SPG11-213ENST00000558988 FKBP6O75344 327 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 RHBDL1O75783 438 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 ECDO95905 644 aaPredicted RBP6.01□□□□□ -1.45
SPG11-213ENST00000558988 PAHP00439 452 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 LHBP01229 141 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 HMGN1P05114 100 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 GLRA1P23415 457 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 EEF1B2P24534 225 aaKnown RBP6.01□□□□□ -1.45
SPG11-213ENST00000558988 DEFA6Q01524 100 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 FOXI1Q12951 378 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 ODF4Q2M2E3 257 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 CDONQ4KMG0 1287 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 MIDNQ504T8 468 aa6.01□□□□□ -1.45
SPG11-213ENST00000558988 PLCXD3Q63HM9 321 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms