RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 PPIAL4AQ9Y536 164 aa11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 MAP1AP78559 2803 aaPredicted RBP11.88□□□□□ -0.51
SUPT16H-208ENST00000557652 LGALS8O00214 317 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 IGHV2-70P01814 119 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 PGA5P0DJD9 388 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 SMIM18P0DKX4 95 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 PMELP40967 661 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 CAPZA1P52907 286 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 GP2P55259 537 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 FABP5Q01469 135 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 PDZK1IP1Q13113 114 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 CARTPTQ16568 116 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 MICBQ29980 383 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 SMIM21Q3B7S5 101 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 SPRNQ5BIV9 151 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 TEX36Q5VZQ5 186 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 ASPHD2Q6ICH7 369 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 TMEM91Q6ZNR0 172 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 LRRC28Q86X40 367 aaPredicted RBP11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 TGIF2LYQ8IUE0 185 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 GCSAMQ8N6F7 178 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 POC1AQ8NBT0 407 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 ZNF420Q8TAQ5 688 aaPredicted RBP11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 TRMT10AQ8TBZ6 339 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 LRRC29Q8WV35 223 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 RPL3LQ92901 407 aaKnown RBP11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 TMEM203Q969S6 136 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 RAB39BQ96DA2 213 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 Q96MF0 132 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 BPESC1Q9GZL8 116 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 FGF23Q9GZV9 251 aaPredicted RBP11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 METTL17Q9H7H0 456 aaPredicted RBP11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 PPP1R3EQ9H7J1 279 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 CSMD2Q7Z408 3487 aa11.87□□□□□ -0.51
SUPT16H-208ENST00000557652 MALRD1Q5VYJ5 2156 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 IGHV4-30-2A0A087WSY4 118 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 OOEPA6NGQ2 149 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 PDCD5O14737 125 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 PIN1P1O15428 100 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 TMEM127O75204 238 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 ZNF780AO75290 641 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 CD37P11049 281 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 FOSL1P15407 271 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 CD36P16671 472 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 MYL9P24844 172 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 ZNF93P35789 620 aaPredicted RBP11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 GPR176Q14439 515 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 DDI2Q5TDH0 399 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 FIP1L1Q6UN15 594 aaKnown RBP11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 DCDC5Q6ZRR9 648 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 TPRA1Q86W33 373 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 GPER1Q99527 375 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 REG4Q9BYZ8 158 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 GHRLQ9UBU3 117 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 SCOCQ9UIL1 159 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 ITGB1BP2Q9UKP3 347 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 CACNG2Q9Y698 323 aa11.86□□□□□ -0.51
SUPT16H-208ENST00000557652 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 TRAV8-7A0A075B6U6 113 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 LYNX1G3V0Z9 82 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 TRAPPC2LH3BP13 241 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 CYB5R3P00387 301 aaPredicted RBP11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 LYNX1P0DP58 116 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 GLRA1P23415 457 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 ERVK11-1P61568 191 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 ZNF404Q494X3 552 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 ATPAF1Q5TC12 328 aaPredicted RBP11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 ASCL4Q6XD76 172 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 CALHM1Q8IU99 346 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 OR51A2Q8NGJ7 313 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 OR13F1Q8NGS4 319 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 OR51F2Q8NH61 342 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 NPRL2Q8WTW4 380 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 TMIGD2Q96BF3 282 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 POM121Q96HA1 1249 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 CEP19Q96LK0 163 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 S100A13Q99584 98 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 NRIP2Q9BQI9 281 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 HES4Q9HCC6 221 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 IL36GQ9NZH8 169 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 KAAG1Q9UBP8 84 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 MIOXQ9UGB7 285 aa11.85□□□□□ -0.51
SUPT16H-208ENST00000557652 KDM4BO94953 1096 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 UBBP0CG47 229 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 CALRP27797 417 aaKnown RBP11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 CFPP27918 469 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 PTGFRP43088 359 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 RPL5P46777 297 aaKnown RBP11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 ALDH3B2P48448 385 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 ZP1P60852 638 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 ZMYND11Q15326 602 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 SPIN3Q5JUX0 258 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 ELP2Q6IA86 826 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 ZNF826PQ6ZT77 177 aa11.84□□□□□ -0.51
SUPT16H-208ENST00000557652 SLC25A26Q70HW3 274 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms