RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MAGEB3O15480 346 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 ARL6IP5O75915 188 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 ZNF181Q2M3W8 571 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 SFRP4Q6FHJ7 346 aaPredicted RBP12.85□□□□□ -0.35
NEDD1-213ENST00000557644 SLC25A26Q70HW3 274 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 OR11L1Q8NGX0 322 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 PHYHIPQ92561 330 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 Q96MF0 132 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 WDR13Q9H1Z4 485 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 MYOZ1Q9NP98 299 aaPredicted RBP12.85□□□□□ -0.35
NEDD1-213ENST00000557644 SSR3Q9UNL2 185 aa12.85□□□□□ -0.35
NEDD1-213ENST00000557644 LRRC30A6NM36 301 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 CLDN25C9JDP6 229 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 ANGPTL7O43827 346 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 IRF2P14316 349 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 GALP22466 123 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 MPZP25189 248 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 FGF9P31371 208 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-213ENST00000557644 TGFBR1P36897 503 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 TMEM33P57088 247 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
NEDD1-213ENST00000557644 PRSS57Q6UWY2 283 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 WIPI2Q9Y4P8 454 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 LHBP01229 141 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 ALDOBP05062 364 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 GIFP27352 417 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 CD80P33681 288 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 ZNF93P35789 620 aaPredicted RBP12.84□□□□□ -0.35
NEDD1-213ENST00000557644 ZP1P60852 638 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 C1QL2Q7Z5L3 287 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 HPS1Q92902 700 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 SLAMF9Q96A28 289 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 GPER1Q99527 375 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 GFI1Q99684 422 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 NAA50Q9GZZ1 169 aaKnown RBP12.84□□□□□ -0.35
NEDD1-213ENST00000557644 NARFLQ9H6Q4 476 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 MTCH1Q9NZJ7 389 aa12.84□□□□□ -0.35
NEDD1-213ENST00000557644 IGKV1-12A0A0C4DH73 117 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 F8VVB4 439 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 F8VWA3 439 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-213ENST00000557644 IGKV1D-12P01611 117 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 CFHR2P36980 270 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 GPR6P46095 362 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-213ENST00000557644 OR3A4PP47883 348 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 ZMYND11Q15326 602 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 SHEQ5VZ18 495 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 JAGN1Q8N5M9 183 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 PKIBQ9C010 78 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 NEK6Q9HC98 313 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 SNTG1Q9NSN8 517 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 AK6Q9Y3D8 172 aaKnown RBP12.83□□□□□ -0.36
NEDD1-213ENST00000557644 NPTNQ9Y639 398 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 CREBBPQ92793 2442 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 SMIM30A4D0T7 59 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 AIREO43918 545 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 CSF3P09919 207 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 RPL5P46777 297 aaKnown RBP12.83□□□□□ -0.36
NEDD1-213ENST00000557644 IL24Q13007 206 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 GPR141Q7Z602 305 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 LYPD6Q86Y78 171 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 C1orf87Q8N0U7 546 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 DEFB108BQ8NET1 73 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 PIMREGQ9BSJ6 248 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 FAM192AQ9GZU8 254 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 CNTD2Q9H8S5 307 aa12.83□□□□□ -0.36
NEDD1-213ENST00000557644 IGHV3OR15-7A0A075B7D8 119 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 VWC2LB2RUY7 222 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 SRRM5B3KS81 715 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 TMEM225BP0DP42 221 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 CALCBP10092 127 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 NR4A2P43354 598 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 NPBWR2P48146 333 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 DSCR9P59020 149 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 BTG1P62324 171 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 GPR107Q5VW38 600 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 OR51F2Q8NH61 342 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 ZNF671Q8TAW3 534 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 TNFAIP8L1Q8WVP5 186 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 POLDIP2Q9Y2S7 368 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 MAST4O15021 2626 aa12.82□□□□□ -0.36
NEDD1-213ENST00000557644 ISPDA4D126 451 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 NDUFS8O00217 210 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 IGHV2-70P01814 119 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 PGA5P0DJD9 388 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 OR10A3P58181 314 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 SLC16A12Q6ZSM3 486 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 PEG10Q86TG7 708 aaKnown RBP12.81□□□□□ -0.36
NEDD1-213ENST00000557644 NRIP2Q9BQI9 281 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 GSTK1Q9Y2Q3 226 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 MED13LQ71F56 2210 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 PPIAL4EA0A075B759 164 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 PPIAL4DF5H284 164 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 CDRT1O95170 752 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 PPIAL4FP0DN26 164 aa12.81□□□□□ -0.36
NEDD1-213ENST00000557644 BCL3P20749 454 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms