RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 EGR3Q06889 387 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 SMIM21Q3B7S5 101 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 DNAL1Q4LDG9 190 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 FAHD1Q6P587 224 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 MEPCEQ7L2J0 689 aaKnown RBP12.95□□□□□ -0.34
TUBB3-213ENST00000557262 ZNF573Q86YE8 665 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 ZNF561Q8N587 486 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 CD177Q8N6Q3 437 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 OR51G2Q8NGK0 314 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 OR5K1Q8NHB7 308 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 C17orf50Q8WW18 174 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 C19orf12Q9NSK7 152 aa12.95□□□□□ -0.34
TUBB3-213ENST00000557262 PRKDCP78527 4128 aaKnown RBP12.95□□□□□ -0.34
TUBB3-213ENST00000557262 LOC110117498-PIK3R3F6TDL0 507 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 SLC1A7O00341 560 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 DLGAP1O14490 977 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 PRKYO43930 277 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 SRSF10O75494 262 aaKnown RBP12.94□□□□□ -0.34
TUBB3-213ENST00000557262 PGA5P0DJD9 388 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 GABRA5P31644 462 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 HAAOP46952 286 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 ESRRGP62508 458 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 RPL31P62899 125 aaKnown RBP12.94□□□□□ -0.34
TUBB3-213ENST00000557262 MFGE8Q08431 387 aaPredicted RBP12.94□□□□□ -0.34
TUBB3-213ENST00000557262 AANATQ16613 207 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 CLVS2Q5SYC1 327 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 TMEM200BQ69YZ2 307 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 ZNF322Q6U7Q0 402 aaPredicted RBP12.94□□□□□ -0.34
TUBB3-213ENST00000557262 MKXQ8IYA7 352 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 ELMOD2Q8IZ81 293 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 C11orf42Q8N5U0 333 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 OR2T27Q8NH04 317 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 ZNF488Q96MN9 340 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 CNN2Q99439 309 aaKnown RBP12.94□□□□□ -0.34
TUBB3-213ENST00000557262 MNTQ99583 582 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 TTTY10Q9BZA0 68 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 PRRG3Q9BZD7 231 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 POMPQ9Y244 141 aa12.94□□□□□ -0.34
TUBB3-213ENST00000557262 hCG_1809904A0A1W2PP81 198 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 A0A1W2PPE2 198 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 A0A1W2PR64 198 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 A0A1W2PRV1 198 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 J3QT63 122 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 SYNGR1O43759 233 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 TSPAN15O95858 294 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 KIR2DS4P43632 304 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 CXCR4P61073 352 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 EFNB1P98172 346 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 LY6EQ16553 131 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 C2orf68Q2NKX9 166 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 LRRC75BQ2VPJ9 315 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 TMEM42Q69YG0 159 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 BCDIN3DQ7Z5W3 292 aaKnown RBP12.93□□□□□ -0.34
TUBB3-213ENST00000557262 PPP1R35Q8TAP8 253 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 FAM110DQ8TAY7 271 aaPredicted RBP12.93□□□□□ -0.34
TUBB3-213ENST00000557262 RORBQ92753 470 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 GPR173Q9NS66 373 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 OR52A1Q9UKL2 312 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 GTF2A1LQ9UNN4 478 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 POLDIP2Q9Y2S7 368 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 R4GMQ9 66 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 V9GYS6 101 aa12.93□□□□□ -0.34
TUBB3-213ENST00000557262 A0A1B0GTI1 187 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 PQLC2LA1A4F0 135 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 MAGEB4O15481 346 aaPredicted RBP12.92□□□□□ -0.34
TUBB3-213ENST00000557262 NXPH2O95156 264 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 CSF1P09603 554 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 LGALS4P56470 323 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 HERPUD1Q15011 391 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 BCL2L15Q5TBC7 163 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 NXNL2Q5VZ03 156 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 C11orf88Q6PI97 169 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 Q6ZSR3 168 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 Q6ZTK2 550 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 ASRGL1Q7L266 308 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 CALHM1Q8IU99 346 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 SLC35F2Q8IXU6 374 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 TCEANCQ8N8B7 351 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 OR4M1Q8NGD0 313 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 OR14K1Q8NGZ2 314 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 UTP4Q969X6 686 aaKnown RBP12.92□□□□□ -0.34
TUBB3-213ENST00000557262 SLC7A6OSQ96CW6 309 aaPredicted RBP12.92□□□□□ -0.34
TUBB3-213ENST00000557262 MOB1AQ9H8S9 216 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 RAB18Q9NP72 206 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 USE1Q9NZ43 259 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 SNX5Q9Y5X3 404 aa12.92□□□□□ -0.34
TUBB3-213ENST00000557262 DHRS7CA6NNS2 312 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 ZNF670-ZNF695F2Z2N8 137 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 DNAJC8O75937 253 aaPredicted RBP12.91□□□□□ -0.34
TUBB3-213ENST00000557262 TK1P04183 234 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 CEBPDP49716 269 aaPredicted RBP12.91□□□□□ -0.34
TUBB3-213ENST00000557262 AADACL4Q5VUY2 407 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 SLX4IPQ5VYV7 408 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 CRIP3Q6Q6R5 217 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 DTX3Q8N9I9 347 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 OR4C13Q8NGP0 309 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 TMEM163Q8TC26 289 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 NRIP2Q9BQI9 281 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms