RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 RASL12Q9NYN1 266 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 OR14J1Q9UGF5 321 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 CD300AQ9UGN4 299 aa11.12□□□□□ -0.63
ACTN1-219ENST00000556432 SH2D7A6NKC9 451 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-219ENST00000556432 C17orf98A8MV24 154 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 NME4O00746 187 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 RAMP3O60896 148 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF728P0DKX0 622 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 LYL1P12980 280 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 SPI1P17947 270 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 CD24P25063 80 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 THBS3P49746 956 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 DLX6P56179 175 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 EDDM3BP56851 147 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 C16orf82Q7Z2V1 217 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-219ENST00000556432 ERI1Q8IV48 349 aaKnown RBP11.11□□□□□ -0.63
ACTN1-219ENST00000556432 ASCC1Q8N9N2 400 aaKnown RBP11.11□□□□□ -0.63
ACTN1-219ENST00000556432 GNPDA2Q8TDQ7 276 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 RNF133Q8WVZ7 376 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 C7orf34Q96L11 122 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 SAR1AQ9NR31 198 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 CDH10Q9Y6N8 788 aa11.11□□□□□ -0.63
ACTN1-219ENST00000556432 LCE6AA0A183 80 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-219ENST00000556432 DNAJC8O75937 253 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-219ENST00000556432 NXPH2O95156 264 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 TK1P04183 234 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 IGHV1-8P0DP01 117 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 CLUP10909 449 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 OPRL1P41146 370 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 GSSP48637 474 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 ACTA2P62736 377 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 ACTG2P63267 376 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 ACTC1P68032 377 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 ACTA1P68133 377 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 TSPAN31Q12999 210 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 IL18R1Q13478 541 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 CRMP1Q14194 572 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 CEACAM21Q3KPI0 293 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 MINOS1Q5TGZ0 78 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 PLCXD3Q63HM9 321 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 C8orf86Q6ZUL3 223 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 COMMD2Q86X83 199 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 BATF2Q8N1L9 274 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 POC1AQ8NBT0 407 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 STMN2Q93045 179 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 INTS14Q96SY0 518 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 SLC25A33Q9BSK2 321 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 LIN7BQ9HAP6 207 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 TBC1D23Q9NUY8 699 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 SAMD4AQ9UPU9 718 aaKnown RBP11.1□□□□□ -0.63
ACTN1-219ENST00000556432 MINOS1-NBL1R4GNA1 71 aa11.1□□□□□ -0.63
ACTN1-219ENST00000556432 DYNC2H1Q8NCM8 4307 aaKnown RBP11.09□□□□□ -0.63
ACTN1-219ENST00000556432 PSMB11A5LHX3 300 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 OR5B21A6NL26 309 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 FAM90A22PA8MWA6 464 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 GMNNO75496 209 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 RBP4P02753 201 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 PGA5P0DJD9 388 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 BLVRAP53004 296 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 RPL23AP62750 156 aaKnown RBP11.09□□□□□ -0.63
ACTN1-219ENST00000556432 RPL13AP3Q6NVV1 102 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 MOB3CQ70IA8 216 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF329Q86UD4 541 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 OSR2Q8N2R0 312 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 ZNF676Q8N7Q3 588 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 OTULINQ96BN8 352 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 AMELYQ99218 206 aa11.09□□□□□ -0.63
ACTN1-219ENST00000556432 LSM4Q9Y4Z0 139 aaKnown RBP11.09□□□□□ -0.63
ACTN1-219ENST00000556432 IGHV2-26A0A0B4J1V2 119 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 BRS3P32247 399 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 MAP2K3P46734 347 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 LUMP51884 338 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-219ENST00000556432 ARHGDIBP52566 201 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 C18orf65Q6ZTR6 163 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 MEPCEQ7L2J0 689 aaKnown RBP11.08□□□□□ -0.64
ACTN1-219ENST00000556432 GDPD3Q7L5L3 318 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 OR2W3Q7Z3T1 314 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 OR8B12Q8NGG6 310 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 OR5A2Q8NGI9 324 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 OR8B4Q96RC9 309 aa11.08□□□□□ -0.64
ACTN1-219ENST00000556432 RIIAD1A6NNX1 92 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 IFNGP01579 166 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 HTR1DP28221 377 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 GSTT1P30711 240 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 RRM2P31350 389 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 MYCNOSP40205 109 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 ECI1P42126 302 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 EDDM3AQ14507 147 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 SNAPC1Q16533 368 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 SHFQ7M4L6 423 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 RP9Q8TA86 221 aaKnown RBP11.07□□□□□ -0.64
ACTN1-219ENST00000556432 THEM6Q8WUY1 208 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 MCUR1Q96AQ8 359 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 DUX3Q96PT4 197 aa11.07□□□□□ -0.64
ACTN1-219ENST00000556432 HOPXQ9BPY8 73 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-219ENST00000556432 TSSK6Q9BXA6 273 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms