RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TENM1Q9UKZ4 2725 aa1.39□□□□□ -2.19
SCFD1-218ENST00000556256 NID2Q14112 1375 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 GSTTP1A0A1W2PQM5 241 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 ANKRD20A5PA0PJZ0 165 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 GOLGA6L4A6NEF3 574 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 GATCO43716 136 aaKnown RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 NDUFS5O43920 106 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 CNMDO75829 334 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 IGKV1D-16P01601 117 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 MBP02144 154 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 IGLV7-43P04211 117 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 INAFM2P0DMQ5 153 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 TAS2R60P59551 318 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 ADIGQ0VDE8 80 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 TRDNQ13061 729 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 TOMM34Q15785 309 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 HNRNPA1L2Q32P51 320 aaKnown RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 CDNFQ49AH0 187 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 TTC32Q5I0X7 151 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 FAM27D1Q5T7N8 215 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 APOBEC3HQ6NTF7 200 aaKnown RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 DAZ4Q86SG3 579 aaKnown RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 ARHGAP18Q8N392 663 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 OR52K1Q8NGK4 314 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF420Q8TAQ5 688 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 FAM57AQ8TBR7 257 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 TNFRSF14Q92956 283 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 HGDQ93099 445 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 FAM131CQ96AQ9 280 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 CENPNQ96H22 339 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 MAP1LC3CQ9BXW4 147 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 TBL1XR1Q9BZK7 514 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 GAL3ST2Q9H3Q3 398 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 RDH14Q9HBH5 336 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 FAM60AQ9NP50 221 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 DAZ1Q9NQZ3 744 aaKnown RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 DDIT4Q9NX09 232 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 RAB22AQ9UL26 194 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 SLC7A11Q9UPY5 501 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 CFL2Q9Y281 166 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 NPHP4O75161 1426 aaPredicted RBP1.38□□□□□ -2.19
SCFD1-218ENST00000556256 ELP1O95163 1332 aa1.38□□□□□ -2.19
SCFD1-218ENST00000556256 AQRO60306 1485 aaKnown RBP eCLIP1.37□□□□□ -2.192e-9■■■■■ 39.4
SCFD1-218ENST00000556256 BRCA1P38398 1863 aaKnown RBP1.37□□□□□ -2.19
SCFD1-218ENST00000556256 A0A0G2JMP0 313 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 A0A0X1KG70 313 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 FAM240AA0A1B0GVK7 77 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 H0YC42 278 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 H7C2Y5 167 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 M0R1B8 84 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 PFN1P07737 140 aaKnown RBP1.37□□□□□ -2.19
SCFD1-218ENST00000556256 OR4Q2P0C623 313 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 OR5AC1P0C628 307 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 STAG3L2P0CL84 134 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 HOXB8P17481 243 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-218ENST00000556256 HLA-GP17693 338 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 TEAD1P28347 426 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 OR12D2P58182 307 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 RPS11P62280 158 aaKnown RBP eCLIP1.37□□□□□ -2.19
SCFD1-218ENST00000556256 DYNC1I2Q13409 638 aaKnown RBP1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF235Q14590 738 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 MAPRE2Q15555 327 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 TAL2Q16559 108 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 NDUFAF6Q330K2 333 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 DUPD1Q68J44 220 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ZFAND6Q6FIF0 208 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 SLC25A25Q6KCM7 469 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 PRNTQ86SH4 94 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 LRRC8AQ8IWT6 810 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ZFP62Q8NB50 900 aaPredicted RBP1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF680Q8NEM1 530 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF555Q8NEP9 628 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 OR13C9Q8NGT0 318 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 NT5CQ8TCD5 201 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ORAOV1Q8WV07 137 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 MITD1Q8WV92 249 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 CACNG8Q8WXS5 425 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ING5Q8WYH8 240 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 SEC22CQ9BRL7 303 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 C6orf50Q9HD87 102 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 LZTFL1Q9NQ48 299 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 IFNKQ9P0W0 207 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 STX18Q9P2W9 335 aaKnown RBP1.37□□□□□ -2.19
SCFD1-218ENST00000556256 HMGXB4Q9UGU5 601 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ACOT9Q9Y305 439 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 ENPP4Q9Y6X5 453 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 MROH5Q6ZUA9 1318 aa1.37□□□□□ -2.19
SCFD1-218ENST00000556256 TNIKQ9UKE5 1360 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 IZUMO1RA6ND01 250 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 ZNF593O00488 134 aaPredicted RBP1.36□□□□□ -2.19
SCFD1-218ENST00000556256 VAPBO95292 243 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 HTR2CP28335 458 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 RGS6P49758 472 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 ATP5J2P56134 94 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 ATP5G2Q06055 141 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 IFFO1Q0D2I5 559 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 LAMTOR4Q0VGL1 99 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 HSP90AA4PQ58FG1 418 aa1.36□□□□□ -2.19
SCFD1-218ENST00000556256 MRPL2Q5T653 305 aaKnown RBP1.36□□□□□ -2.19
SCFD1-218ENST00000556256 KCTD16Q68DU8 428 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms