RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 OR11H7Q8NGC8 314 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 OR4D10Q8NGI6 311 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 OR51S1Q8NGJ8 323 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 OR51T1Q8NGJ9 327 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 OR5L1Q8NGL2 311 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 OR6K3Q8NGY3 331 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 ASB13Q8WXK3 278 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 CMBLQ96DG6 245 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 BORCS8Q96FH0 119 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 WBP1Q96G27 269 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 HYLS1Q96M11 299 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 Q96M66 194 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 TAAR6Q96RI8 345 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 GINS4Q9BRT9 223 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 RANBP3Q9H6Z4 567 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-235ENST00000556082 ZMAT3Q9HA38 289 aaKnown RBP7.15□□□□□ -1.26
ATXN3-235ENST00000556082 PLSCR4Q9NRQ2 329 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 GPR173Q9NS66 373 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 NKIRAS2Q9NYR9 191 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 FLVCR2Q9UPI3 526 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 PLEKHA6Q9Y2H5 1048 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 KCNK7Q9Y2U2 307 aa7.15□□□□□ -1.26
ATXN3-235ENST00000556082 IGKV1-27A0A075B6S5 117 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 PQLC2LA1A4F0 135 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 CNOT1A5YKK6 2376 aaKnown RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 FAM172BPA6NC97 362 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 CEACAM18A8MTB9 384 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 A8MV72 311 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 RGS13O14921 159 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 CREBL2O60519 120 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 HOXD4P09016 255 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 TMEM225BP0DP42 221 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ANXA3P12429 323 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 COX5AP20674 150 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 TUBG1P23258 451 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 APLNRP35414 380 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 GNG2P59768 71 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 PDZK1IP1Q13113 114 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 P2RY6Q15077 328 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 GABRA6Q16445 453 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 EIF2S3LQ2VIR3 472 aaKnown RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ACSF3Q4G176 576 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 HIKESHIQ53FT3 197 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 KRTCAP3Q53RY4 240 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 RNASE10Q5GAN6 216 aaKnown RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 C1QTNF12Q5T7M4 302 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 C9orf135Q5VTT2 229 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 FAAP20Q6NZ36 180 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 MUC6Q6W4X9 2439 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 IDO2Q6ZQW0 420 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 MOB3CQ70IA8 216 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 MRPL21Q7Z2W9 205 aaKnown RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 TMEM200AQ86VY9 491 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 HOGA1Q86XE5 327 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 BPIFB2Q8N4F0 458 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ARRDC1Q8N5I2 433 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 FAM169BQ8N8A8 192 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ZDHHC22Q8N966 263 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 OR8S1Q8NH09 359 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ZFAND1Q8TCF1 268 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 CCDC107Q8WV48 283 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ARHGAP5-AS1Q96IT6 56 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 TRIB1Q96RU8 372 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 NICN1Q9BSH3 213 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 TINAGL1Q9GZM7 467 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 BANF2Q9H503 90 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 OBP2BQ9NPH6 170 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 TUBG2Q9NRH3 451 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ITGB1BP2Q9UKP3 347 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ELF5Q9UKW6 265 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 PAIP2BQ9ULR5 123 aaKnown RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 STARD10Q9Y365 291 aa7.14□□□□□ -1.27
ATXN3-235ENST00000556082 ZFHX2Q9C0A1 2572 aaPredicted RBP7.14□□□□□ -1.27
ATXN3-235ENST00000556082 RIF1Q5UIP0 2472 aaKnown RBP7.13□□□□□ -1.27
ATXN3-235ENST00000556082 WDFY3Q8IZQ1 3526 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 A0A1W2PP11 408 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM230AA0A1W2PPH8 454 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 MEIS3P1A6NDR6 274 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A10PA6NDY2 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 MBD3L4A6NDZ8 208 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A18PA6NE21 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 MBD3L3A6NE82 208 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A16PA6NEW6 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A20PA6NIJ5 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 MBD3L5A6NJ08 208 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A8PA6NJQ4 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A7PA6NKC0 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 CD300LBA8K4G0 201 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A22PA8MWA6 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A12PA8MX19 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A5PA8MXJ8 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A23PA8MXZ1 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 H3BUI4 141 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 SSNA1O43805 119 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 OR2A4O95047 310 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 AMY2AP04746 511 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A15PP0C7V4 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A13PP0C7W8 464 aa7.13□□□□□ -1.27
ATXN3-235ENST00000556082 FAM90A14PP0C7W9 464 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms