RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 IGHV3OR16-10A0A075B7F0 116 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 TRAV40A0A0B4J280 105 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 FAM230AA0A1W2PPH8 454 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 OR2AT4A6NND4 320 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 E9PI62 339 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 VENTXO95231 258 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 GNAO1P09471 354 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 LIMS3P0CW19 117 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 LIMS4P0CW20 117 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 PGA5P0DJD9 388 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 PPIAL4GP0DN37 164 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 MPZP25189 248 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 CAPGP40121 348 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 IL18R1Q13478 541 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 DGUOKQ16854 277 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 SMIM21Q3B7S5 101 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 BTN2A1Q7KYR7 527 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 ANGPTL5Q86XS5 388 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 CALHM1Q8IU99 346 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 BATF2Q8N1L9 274 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 BPIFB2Q8N4F0 458 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF418Q8TF45 676 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-219ENST00000555563 PP6455Q8WZ26 134 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 C10orf35Q96D05 121 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 FGF20Q9NP95 211 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF69Q9UC07 566 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 RPUSD1Q9UJJ7 312 aaKnown RBP11.36□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF222Q9UK12 451 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 SLC7A11Q9UPY5 501 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 ATRQ13535 2644 aa11.36□□□□□ -0.59
SHMT2-219ENST00000555563 H0YAE9 185 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 SIGLEC5O15389 551 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 NDUFB3O43676 98 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 ZFPL1O95159 310 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 SFTPBP07988 381 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 IGHV4-38-2P0DP08 117 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 PSG2P11465 335 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF20P17024 532 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 TGM4P49221 684 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 ETV1P50549 477 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 IL13RA1P78552 427 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 CNN3Q15417 329 aaKnown RBP11.35□□□□□ -0.59
SHMT2-219ENST00000555563 LRRC10Q5BKY1 277 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 ACP7Q6ZNF0 438 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 C8orf59Q8N0T1 100 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF676Q8N7Q3 588 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 PNLDC1Q8NA58 520 aaKnown RBP11.35□□□□□ -0.59
SHMT2-219ENST00000555563 OR13C3Q8NGS6 347 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 NRIP2Q9BQI9 281 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 PKIBQ9C010 78 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 VCXQ9H320 206 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 RASL12Q9NYN1 266 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 HHLA2Q9UM44 414 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 HSPE1-MOB4S4R3N1 261 aa11.35□□□□□ -0.59
SHMT2-219ENST00000555563 A0A0A6YYJ9 748 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 IGKV1-9A0A0C4DH69 117 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 IRGMA1A4Y4 181 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 ZNF879B4DU55 563 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 NXPH2O95156 264 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 ECDO95905 644 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-219ENST00000555563 PLATP00750 562 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 SERPINA3P01011 423 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 LIPFP07098 398 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 MMP9P14780 707 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 DCKP27707 260 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 GABRA2P47869 451 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 FUT6P51993 359 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 GBX2P52951 348 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-219ENST00000555563 HILS1P60008 231 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 SLC34A1Q06495 639 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 IL24Q13007 206 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 MRPL28Q13084 256 aaKnown RBP11.34□□□□□ -0.59
SHMT2-219ENST00000555563 TUSC1Q2TAM9 212 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 C11orf91Q3C1V1 193 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 OR2G6Q5TZ20 316 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 LAIR2Q6ISS4 152 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 UTS2BQ765I0 119 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 EGFL6Q8IUX8 553 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 BCL6BQ8N143 479 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-219ENST00000555563 FGGYQ96C11 551 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 BORCS8Q96FH0 119 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 MED30Q96HR3 178 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 PDCD1LG2Q9BQ51 273 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 PCGF1Q9BSM1 259 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 SUCNR1Q9BXA5 334 aa11.34□□□□□ -0.59
SHMT2-219ENST00000555563 SLC25A10Q9UBX3 287 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-219ENST00000555563 DIMT1Q9UNQ2 313 aaKnown RBP11.34□□□□□ -0.59
SHMT2-219ENST00000555563 TMEM212A6NML5 194 aa11.33□□□□□ -0.6
SHMT2-219ENST00000555563 NOS1APO75052 506 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-219ENST00000555563 ACAA1P09110 424 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-219ENST00000555563 CCDC159P0C7I6 412 aa11.33□□□□□ -0.6
SHMT2-219ENST00000555563 ATF1P18846 271 aa11.33□□□□□ -0.6
SHMT2-219ENST00000555563 MYL12AP19105 171 aa11.33□□□□□ -0.6
SHMT2-219ENST00000555563 FPR2P25090 351 aa11.33□□□□□ -0.6
SHMT2-219ENST00000555563 AZGP1P25311 298 aaKnown RBP11.33□□□□□ -0.6
SHMT2-219ENST00000555563 CEBPDP49716 269 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-219ENST00000555563 GTF2A1P52655 376 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms